Package: uncalled (2.3+ds-3 and others)

[ Source: uncalled  ]

Utility for Nanopore Current Alignment to Large Expanses of DNA

Streaming algorithm for mapping raw nanopore signal to DNA references

Enables real-time enrichment or depletion on Oxford Nanopore Technologies (ONT) MinION runs via ReadUntil.

Also supports standalone signal mapping of fast5 reads

Other Packages Related to uncalled

• dep: libc6 (>= 2.38) [not alpha, ia64, sh4]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

  dep: libc6 (>= 2.40) [sh4]

• dep: libc6.1 (>= 2.37) [ia64]

  GNU C Library: Shared libraries
  also a virtual package provided by libc6.1-udeb

  dep: libc6.1 (>= 2.38) [alpha]

• dep: libgcc-s1 (>= 3.0) [arm64, ppc64el, s390x]

  GCC support library

  dep: libgcc-s1 (>= 3.4) [alpha, amd64, mips64el, ppc64, riscv64, sparc64]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

  dep: libgcc-s1 (>= 4.2) [i386, ia64, sh4]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC support library

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC support library

• dep: libhdf5-103-1t64 [ia64]

  HDF5 C runtime files - serial version

• dep: libhdf5-310 (>= 1.14.3) [not ia64]

  HDF5 C runtime files - serial version

• dep: libstdc++6 (>= 13.1) [ia64, m68k]

  GNU Standard C++ Library v3

  dep: libstdc++6 (>= 14) [not ia64, m68k]

• dep: libunwind8 [ia64]

  library to determine the call-chain of a program - runtime

• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (<< 3.13) [ia64]

  dep: python3 (<< 3.14) [not ia64]

  dep: python3 (>= 3.11~) [ia64]

  dep: python3 (>= 3.13~) [not ia64]

• dep: python3-numpy

  Python library for numerical computations (Python 3)

• dep: zlib1g (>= 1:1.1.4) [not armel, armhf, hppa, m68k, sh4]

  compression library - runtime

  dep: zlib1g (>= 1:1.2.3.3) [armel, armhf, hppa, m68k, sh4]

Download uncalled

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	2.3+ds-3+b2	589.9 kB	2,311.0 kB	[list of files]
amd64	2.3+ds-3+b3	638.5 kB	2,099.0 kB	[list of files]
arm64	2.3+ds-3+b2	563.1 kB	2,039.0 kB	[list of files]
armel	2.3+ds-3+b2	542.9 kB	1,782.0 kB	[list of files]
armhf	2.3+ds-3+b2	560.4 kB	1,462.0 kB	[list of files]
hppa (unofficial port)	2.3+ds-3+b2	636.5 kB	2,274.0 kB	[list of files]
i386	2.3+ds-3+b2	677.4 kB	2,134.0 kB	[list of files]
ia64 (unofficial port)	2.3+ds-1+b1	861.6 kB	6,434.0 kB	[list of files]
m68k (unofficial port)	2.3+ds-3+b2	583.8 kB	1,958.0 kB	[list of files]
mips64el	2.3+ds-3+b2	543.2 kB	2,360.0 kB	[list of files]
ppc64 (unofficial port)	2.3+ds-3+b2	608.0 kB	2,423.0 kB	[list of files]
ppc64el	2.3+ds-3+b2	624.9 kB	2,359.0 kB	[list of files]
riscv64	2.3+ds-3+b2	629.7 kB	1,711.0 kB	[list of files]
s390x	2.3+ds-3+b2	632.8 kB	2,147.0 kB	[list of files]
sh4 (unofficial port)	2.3+ds-3+b2	760.6 kB	2,043.0 kB	[list of files]
sparc64 (unofficial port)	2.3+ds-3+b2	517.8 kB	2,370.0 kB	[list of files]