Package: r-bioc-genomicalignments (1.40.0-1)

[ Source: r-bioc-genomicalignments  ]

BioConductor representation and manipulation of short genomic alignments

This BioConductor package provides efficient containers for storing and manipulating short genomic alignments (typically obtained by aligning short reads to a reference genome). This includes read counting, computing the coverage, junction detection, and working with the nucleotide content of the alignments.

Other Packages Related to r-bioc-genomicalignments

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• dep: r-api-4.0

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• dep: r-api-bioc-3.19

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• dep: r-bioc-biocgenerics (>= 0.50.0)

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• dep: r-bioc-biocparallel (>= 1.38.0)

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• dep: r-bioc-biostrings (>= 2.72.1)

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• dep: r-bioc-genomeinfodb (>= 1.40.1)

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• dep: r-bioc-genomicranges (>= 1.56.1)

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• dep: r-bioc-iranges (>= 2.38.1)

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• dep: r-bioc-rsamtools (>= 2.20.0)

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• sug: r-bioc-biocstyle (>= 2.32.1)

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• sug: r-bioc-bsgenome (>= 1.72.0)

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• sug: r-bioc-shortread (>= 1.62.0)

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