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[ Source: minimap2  ]

Package: python3-mappy (2.24+dfsg-3 and others)

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Python3 interface minimap2

Minimap2 is a versatile sequence alignment program that aligns DNA or mRNA sequences against a large reference database. Typical use cases include: (1) mapping PacBio or Oxford Nanopore genomic reads to the human genome; (2) finding overlaps between long reads with error rate up to ~15%; (3) splice-aware alignment of PacBio Iso-Seq or Nanopore cDNA or Direct RNA reads against a reference genome; (4) aligning Illumina single- or paired-end reads; (5) assembly-to-assembly alignment; (6) full- genome alignment between two closely related species with divergence below ~15%.

This package contains the Python3 interface for using minimap2.

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Download for all available architectures
Architecture Version Package Size Installed Size Files
amd64 2.24+dfsg-3+b1 130.2 kB330.0 kB [list of files]
arm64 2.24+dfsg-3+b1 127.2 kB370.0 kB [list of files]
armel 2.24+dfsg-3+b1 143.1 kB380.0 kB [list of files]
armhf 2.24+dfsg-3+b1 144.0 kB280.0 kB [list of files]
i386 2.24+dfsg-3+b1 172.8 kB485.0 kB [list of files]
mips64el 2.24+dfsg-3+b1 155.2 kB447.0 kB [list of files]
mipsel 2.24+dfsg-3+b1 166.2 kB440.0 kB [list of files]
ppc64el 2.24+dfsg-3+b1 150.4 kB434.0 kB [list of files]
s390x 2.24+dfsg-3+b1 149.5 kB434.0 kB [list of files]