Paket: r-bioc-multtest (2.38.0-1)

[ Quellcode: r-bioc-multtest  ]

Bioconductor resampling-based multiple hypothesis testing

Non-parametric bootstrap and permutation resampling-based multiple testing procedures (including empirical Bayes methods) for controlling the family-wise error rate (FWER), generalized family-wise error rate (gFWER), tail probability of the proportion of false positives (TPPFP), and false discovery rate (FDR). Several choices of bootstrap-based null distribution are implemented (centered, centered and scaled, quantile-transformed). Single-step and step-wise methods are available. Tests based on a variety of t- and F-statistics (including t-statistics based on regression parameters from linear and survival models as well as those based on correlation parameters) are included. When probing hypotheses with t-statistics, users may also select a potentially faster null distribution which is multivariate normal with mean zero and variance covariance matrix derived from the vector influence function. Results are reported in terms of adjusted p-values, confidence regions and test statistic cutoffs. The procedures are directly applicable to identifying differentially expressed genes in DNA microarray experiments.

Andere Pakete mit Bezug zu r-bioc-multtest

• dep: libc6 (>= 2.14) [amd64]

  GNU-C-Bibliothek: Laufzeitbibliotheken
  auch ein virtuelles Paket, bereitgestellt durch libc6-udeb

  dep: libc6 (>= 2.17) [arm64]

  dep: libc6 (>= 2.7) [armhf, i386]

• dep: r-api-3.5

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• dep: r-base-core (>= 3.5.1-1)

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• dep: r-bioc-biobase

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• dep: r-bioc-biocgenerics

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• dep: r-cran-mass

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• dep: r-cran-survival

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• sug: r-cran-snow

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amd64	819,8 kB	1.061,0 kB	[Liste der Dateien]
arm64	817,8 kB	1.058,0 kB	[Liste der Dateien]
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i386	820,5 kB	1.065,0 kB	[Liste der Dateien]