[ Quellcode: optimir ]
Paket: optimir (1.0-3)
Links für optimir
Debian-Ressourcen:
Quellcode-Paket optimir herunterladen:
Betreuer:
Externe Ressourcen:
- Homepage [github.com]
Ähnliche Pakete:
Integrating genetic variations in miRNA alignment
OptimiR is a miRSeq data alignment workflow. It integrates genetic information to assess the impact of variants on miRNA expression.
OptimiR: A bioinformatics pipeline designed to detect and quantify miRNAs, isomiRs and polymiRs from miRSeq data, & study the impact of genetic variations on polymiRs' expression.
Andere Pakete mit Bezug zu optimir
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- dep: bowtie2
- Ultraschnelles und speichersparendes Alignmentprogramm für kurze DNA-Sequenzen
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- dep: cutadapt
- Clean biological sequences from high-throughput sequencing reads
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- dep: python3
- Interaktive objektorientierte Hochsprache (Python3-Standardversion)
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- dep: python3-biopython
- Python-3-Bibliothek für die Bioinformatik
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- dep: python3-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
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- dep: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
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- rec: r-cran-ggplot2
- Implementierung der »Grammar of Graphics«
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- rec: r-cran-gridextra
- GNU R: Erweiterungen für das grid-Paket
optimir herunterladen
| Architektur | Paketgröße | Größe (installiert) | Dateien |
|---|---|---|---|
| all | 1.004,0 kB | 7.404,0 kB | [Liste der Dateien] |