Package: r-bioc-dexseq (1.50.0+dfsg-1)
Links for r-bioc-dexseq
Debian Resources:
Download Source Package r-bioc-dexseq:
- [r-bioc-dexseq_1.50.0+dfsg-1.dsc]
- [r-bioc-dexseq_1.50.0+dfsg.orig.tar.xz]
- [r-bioc-dexseq_1.50.0+dfsg-1.debian.tar.xz]
Maintainers:
External Resources:
- Homepage [bioconductor.org]
Similar packages:
GNU R inference of differential exon usage in RNA-Seq
The package is focused on finding differential exon usage using RNA-seq exon counts between samples with different experimental designs. It provides functions that allows the user to make the necessary statistical tests based on a model that uses the negative binomial distribution to estimate the variance between biological replicates and generalized linear models for testing. The package also provides functions for the visualization and exploration of the results.
Other Packages Related to r-bioc-dexseq
|
|
|
|
-
- dep: r-api-4.0
- virtual package provided by r-base-core
-
- dep: r-api-bioc-3.19
- virtual package provided by r-bioc-biocgenerics
-
- dep: r-bioc-annotationdbi (>= 1.66.0)
- GNU R Annotation Database-grænseflade for BioConductor
-
- dep: r-bioc-biobase (>= 2.64.0)
- Grundlæggende funktioner for Bioconductor
-
- dep: r-bioc-biocgenerics (>= 0.50.0)
- Generiske funktioner for Bioconductor
-
- dep: r-bioc-biocparallel (>= 1.38.0)
- BioConductor - faciliteter for parallel evulering
-
- dep: r-bioc-biomart (>= 2.60.1)
- GNU R Interface til BioMart-databsaer (Ensembl, COSMIC, Wormbase og Gramene)
-
- dep: r-bioc-deseq2 (>= 1.44.0)
- R-pakke for RNS-Seq-differentiel udtryksanalyse
-
- dep: r-bioc-genefilter (>= 1.86.0)
- Metoder for filtrering af gener fra microarray-eksperimenter
-
- dep: r-bioc-geneplotter (>= 1.82.0)
- R-pakke med funktioner til plot af genomdata
-
- dep: r-bioc-genomicranges (>= 1.56.1)
- BioConductor-repræsentation og manipulation af genomiske intervaller
-
- dep: r-bioc-iranges (>= 2.38.1)
- GNU R - containere på lavt niveau til at lagre sæt af heltalsintervaller
-
- dep: r-bioc-rsamtools (>= 2.20.0)
- GNU R-binær sammenligning (BAM), variantkald (BCF) eller tabix-filimport
-
- dep: r-bioc-s4vectors (>= 0.42.1)
- BioConductor S4-implementering af vektorer og lister
-
- dep: r-bioc-summarizedexperiment (>= 1.34.0)
- BioConductor - assay-container
-
- dep: r-cran-hwriter
- HTML Writer - R-objekter i HTML-format
-
- dep: r-cran-rcolorbrewer
- GNU R-pakke der tilbyder egnede farvepaletter
-
- dep: r-cran-statmod
- GNU R package providing algorithms and functions for statistical modeling
-
- dep: r-cran-stringr
- Gør det nemmere at arbejde med strenge
-
- sug: r-bioc-biocstyle (>= 2.32.1)
- Standardstile for vignettes og andre Biocunductor-dokumenter
-
- sug: r-bioc-genomicalignments (>= 1.40.0)
- Bioconductor-repræsentation og manipulering af korte arvemassesammenligninger
-
- sug: r-bioc-genomicfeatures (>= 1.56.0)
- GNU R-værktøjer til at lave og manipulere transcript centric-annotationer
-
- sug: r-bioc-glmgampoi (>= 1.16.0)
- GNU R - tilpas en Gamma-Poisson generaliseret lineær model
-
- sug: r-bioc-txdbmaker
- Tools for making TxDb objects from genomic annotations
-
- sug: r-cran-knitr
- GNU R-pakke for dynamisk rapportoprettelse via Literate Programming
-
- sug: r-cran-rmarkdown
- convert R markdown documents into a variety of formats
-
- sug: r-cran-roxygen2
- in-line documentation for GNU R
-
- sug: r-cran-testthat
- GNU R-testpakke
Download r-bioc-dexseq
Architecture | Package Size | Installed Size | Files |
---|---|---|---|
all | 444.8 kB | 676.0 kB | [list of files] |