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[ Source: spoa  ]

Package: spoa (4.0.7+ds-1 and others)

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SIMD-sammenligningsværktøj for partial order

Spoa (SIMD POA) er en c++-implementering af partial order- sammenligningsalgoritmen (POA) (som beskrevet i 10.1093/bioinformatics/18.3.452) som bruges til at oprette konsensussekvenser (som beskrevet i 10.1093/bioinformatics/btg109). Implementeringen understøtter tre sammenligningstilstande: lokal (Smith-Waterman), global (Needleman-Wunsch) og semi-global-sammenligning (overlapning).

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Download spoa

Download for all available architectures
Architecture Version Package Size Installed Size Files
i386 4.0.7+ds-1+b1 37.8 kB78.0 kB [list of files]