Package: r-bioc-edger (3.32.1+dfsg-1)

[ Source: r-bioc-edger  ]

Empirisk analyse af digitale gen-udtryksdata i R

Biokonduktor-pakke til differentieret udtryksanalyse af hel transskriptom- sekventering (RNA-seq) og digitale gen-udtryksprofiler med biologisk replikation. Det bruger empirisk Bayes-estimering og præcise test baseret på den negative binomial-fordelingsdistribution. Det er også nyttigt for differentieret signal-analyse med andre typer optællinger af genom-skala.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::r, interface::commandline, Role: Program

Other Packages Related to r-bioc-edger

• dep: libblas3

  Grundlæggende reference-implementeringer til lineær algebra, delt bibliotek

  or libblas.so.3

  virtual package provided by libatlas3-base, libblas3, libblis3-openmp, libblis3-pthread, libblis3-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libc6 (>= 2.29)

  GNU C-bibliotek: Delte biblioteker
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  GCC støttebibliotek

• dep: liblapack3

  Bibliotek for lineære algebrarutiner 3 - delt version

  or liblapack.so.3

  virtual package provided by libatlas3-base, liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ bibliotek v3

• dep: r-api-4.0

  virtual package provided by r-base-core

• dep: r-api-bioc-3.12

  virtual package provided by r-bioc-biocgenerics

• dep: r-base-core (>= 4.0.3-1)

  GNU R-kerne af statistisk beregning og grafiksystem

• dep: r-bioc-limma (>= 3.41.5)

  Lineære modeller for microarray-data

• dep: r-cran-locfit

  GNU R local regression, likelihood and density estimation

• dep: r-cran-rcpp

  GNU R-pakke for Seamless R og C++-integration

• rec: r-cran-statmod

  GNU R package providing algorithms and functions for statistical modeling

• sug: r-bioc-annotationdbi

  GNU R Annotation Database-grænseflade for BioConductor

• sug: r-bioc-biobase

  Grundlæggende funktioner for Bioconductor

• sug: r-bioc-org.hs.eg.db

  Genom-bred annotation for mennesker

• sug: r-bioc-rhdf5

  BioConductor HDF5 interface to R

• sug: r-bioc-summarizedexperiment

  BioConductor - assay-container

• sug: r-cran-jsonlite

  Robust, High Performance JSON Parser and Generator for R

• sug: r-cran-readr

  GNU R package to read rectangular text data

Download r-bioc-edger

Download for all available architectures

Architecture	Package Size	Installed Size	Files
amd64	1,051.6 kB	1,347.0 kB	[list of files]