Пакет: coot (1.1.09+dfsg-4)

[ Източник: coot  ]

model building program for macromolecular crystallography

This is a program for constructing atomic models of macromolecules from x-ray diffraction data. Coot displays electron density maps and molecular models and allows model manipulations such as idealization, refinement, manual rotation/translation, rigid-body fitting, ligand search, solvation, mutations, rotamers. Validation tools such as Ramachandran and geometry plots are available to the user. This package provides a Coot build with embedded Python support.

Други пакети, свързани с coot

• dep: coot-data

  various data files needed by Coot

• dep: gir1.2-gtk-4.0

  GTK graphical user interface library -- gir bindings

• dep: libasound2t64 (>= 1.0.16)

  shared library for ALSA applications
  също и виртуален пакет, предлаган от liboss4-salsa-asound2

• dep: libatomic1 (>= 4.8)

  support library providing __atomic built-in functions

• dep: libblas3

  Basic Linear Algebra Reference implementations, shared library

  или libblas.so.3

  виртуален пакет, предлаган от libatlas3-base, libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libboost-python1.83.0 (>= 1.83.0)

  Boost.Python Library

• dep: libboost-python1.83.0-py312

  виртуален пакет, предлаган от libboost-python1.83.0

• dep: libc6 (>= 2.38)

  GNU C Library: Shared libraries
  също и виртуален пакет, предлаган от libc6-udeb

• dep: libcairo2 (>= 1.6.0)

  Cairo 2D vector graphics library

• dep: libclipper2 (>= 2.1.20201109)

  object oriented library for crystallographic computing

• dep: libcootapi1.1 (>= 1.1.09+dfsg)

  shared library for coot

• dep: libcurl3t64-gnutls (>= 7.16.2)

  easy-to-use client-side URL transfer library (GnuTLS flavour)

• dep: libepoxy0 (>= 1.3)

  OpenGL function pointer management library

• dep: libfreetype6 (>= 2.2.1)

  FreeType 2 font engine, shared library files

• dep: libgcc-s1 (>= 4.0)

  GCC support library

• dep: libgdk-pixbuf-2.0-0 (>= 2.22.0)

  GDK Pixbuf library

• dep: libglib2.0-0t64 (>= 2.80.0)

  GLib library of C routines

• dep: libgomp1 (>= 6)

  GCC OpenMP (GOMP) support library

• dep: libgraphene-1.0-0 (>= 1.5.4)

  library of graphic data types

• dep: libgsl28 (>= 2.8+dfsg)

  GNU Scientific Library (GSL) -- library package

• dep: libgtk-4-1 (>= 4.12.0)

  GTK graphical user interface library

• dep: libmmdb2-0 (>= 2.0.22)

  macromolecular coordinate library - runtime

• dep: libpango-1.0-0 (>= 1.14.0)

  Layout and rendering of internationalized text

• dep: libpangocairo-1.0-0 (>= 1.14.0)

  Layout and rendering of internationalized text

• dep: libpng16-16t64 (>= 1.6.2)

  PNG library - runtime (version 1.6)

• dep: libpython3.13 (>= 3.13.0~rc3)

  Shared Python runtime library (version 3.13)

• dep: librdkit1t64 (>= 202409.4)

  Collection of cheminformatics and machine-learning software (shared libraries)

• dep: libsqlite3-0 (>= 3.5.9)

  SQLite 3 shared library

• dep: libssm2 (>= 1.4.0)

  macromolecular superposition library - runtime

• dep: libstdc++6 (>= 14)

  GNU Standard C++ Library v3

• dep: libvorbisfile3 (>= 1.1.2)

  high-level API for Vorbis General Audio Compression Codec

• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (<< 3.14)

  dep: python3 (>= 3.13~)

• dep: python3-gi

  Python 3 bindings for gobject-introspection libraries

• dep: python3-rdkit

  Collection of cheminformatics and machine-learning software

• dep: refmac-dictionary

  dictionary for macromolecular refinement and model building

• dep: sfftw2 (>= 2.1.5)

  library for computing Fast Fourier Transforms

• dep: zlib1g (>= 1:1.2.6)

  compression library - runtime

• sug: coot-doc

  documentation for Coot

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