Пакет: libfastahack0 (1.0.0+dfsg-11) [debports]

[ Източник:  ]

library for indexing and sequence extraction from FASTA files (lib)

fastahack is a small application for indexing and extracting sequences and subsequences from FASTA files. The included Fasta.cpp library provides a FASTA reader and indexer that can be embedded into applications which would benefit from directly reading subsequences from FASTA files. The library automatically handles index file generation and use.

Features:

 * FASTA index (.fai) generation for FASTA files
 * Sequence extraction
 * Subsequence extraction
 * Sequence statistics (currently only entropy is provided)

Sequence and subsequence extraction use fseek64 to provide fastest-possible extraction without RAM-intensive file loading operations. This makes fastahack a useful tool for bioinformaticists who need to quickly extract many subsequences from a reference FASTA sequence.

This package contains the dynamic library.

Други пакети, свързани с libfastahack0

• dep: libc6.1 (>= 2.37)

  GNU C Library: Shared libraries
  също и виртуален пакет, предлаган от libc6.1-udeb

• dep: libgcc-s1 (>= 4.2)

  GCC support library

• dep: libstdc++6 (>= 13.1)

  GNU Standard C++ Library v3

• dep: libunwind8

  library to determine the call-chain of a program - runtime

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Архитектура	Големина на пакета	Големина след инсталиране	Файлове
ia64 (неофициална архитектура)	30,7 кБ	117,0 кБ	[списък на файловете]