Пакет: resfinder-example (3.2-3)

[ Източник: resfinder  ]

identify acquired antimicrobial resistance genes (example data)

ResFinder identifies acquired antimicrobial resistance genes in total or partial sequenced isolates of bacteria.

ResFinder that uses BLAST for identification of acquired antimicrobial resistance genes in whole-genome data. As input, the method can use both pre-assembled, complete or partial genomes, and short sequence reads from four different sequencing platforms. The method was evaluated on 1862 GenBank files containing 1411 different resistance genes, as well as on 23 de-novo-sequenced isolates.

This package contains example data to test resfinder.

Други пакети, свързани с resfinder-example

• rec: resfinder

  identify acquired antimicrobial resistance genes

Изтегляне на resfinder-example

Изтегляне за всички налични архитектури

Архитектура	Големина на пакета	Големина след инсталиране	Файлове
all	1 253,6 кБ	1 262,0 кБ	[списък на файловете]