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[ 原始碼: htslib  ]

套件:libhts-dev(1.20+ds-2)

libhts-dev 的相關連結

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下載原始碼套件 htslib

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development files for the HTSlib

HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang.

HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent.

This package contains development files for the HTSlib: headers, static library, manual pages, etc.

For compatibility with sambamba, the internal routine cram_to_bam was exported, hereto adopting a patch found in guix.

標籤: 軟體開發: C 開發, 函式庫, 實做語言: C, 角色: 開發用函式庫

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