[ 原始碼： r-bioc-annotationhub ]
套件：r-bioc-annotationhub（3.12.0+dfsg-1）
r-bioc-annotationhub 的相關連結
Debian 的資源：
下載原始碼套件 r-bioc-annotationhub：
- [r-bioc-annotationhub_3.12.0+dfsg-1.dsc]
- [r-bioc-annotationhub_3.12.0+dfsg.orig.tar.xz]
- [r-bioc-annotationhub_3.12.0+dfsg-1.debian.tar.xz]
維護小組：
外部的資源：
- 主頁 [bioconductor.org]
相似套件：
GNU R client to access AnnotationHub resources
This package provides a client for the Bioconductor AnnotationHub web resource. The AnnotationHub web resource provides a central location where genomic files (e.g., VCF, bed, wig) and other resources from standard locations (e.g., UCSC, Ensembl) can be discovered. The resource includes metadata about each resource, e.g., a textual description, tags, and date of modification. The client creates and manages a local cache of files retrieved by the user, helping with quick and reproducible access.
其他與 r-bioc-annotationhub 有關的套件
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- dep: r-api-4.0
- 本虛擬套件由這些套件填實： r-base-core
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- dep: r-api-bioc-3.19
- 本虛擬套件由這些套件填實： r-bioc-biocgenerics
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- dep: r-bioc-annotationdbi (>= 1.66.0)
- GNU R Annotation Database Interface for BioConductor
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- dep: r-bioc-biocfilecache (>= 2.12.0)
- GNU R management of files across sessions
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- dep: r-bioc-biocgenerics (>= 0.50.0)
- generic functions for Bioconductor
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- dep: r-bioc-biocversion (>= 3.19.1)
- set the appropriate version of Bioconductor packages
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- dep: r-bioc-s4vectors (>= 0.42.1)
- BioConductor S4 implementation of vectors and lists
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- dep: r-cran-biocmanager
- access the Bioconductor project package repository
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- dep: r-cran-curl
- GNU R modern and flexible web client for R
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- dep: r-cran-dplyr
- GNU R grammar of data manipulation
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- dep: r-cran-httr
- GNU R tools for working with URLs and HTTP
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- dep: r-cran-rappdirs
- GNU R application directories
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- dep: r-cran-rsqlite
- Database Interface R driver for SQLite
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- dep: r-cran-yaml
- Methods to convert R data to YAML and back
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- sug: r-bioc-biocstyle (>= 2.32.1)
- standard styles for vignettes and other Bioconductor documents
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- sug: r-bioc-biostrings (>= 2.72.1)
- GNU R string objects representing biological sequences
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- sug: r-bioc-ensembldb (>= 2.28.0)
- GNU R utilities to create and use an Ensembl based annotation database
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- sug: r-bioc-experimenthub (>= 2.12.0)
- BioConductor client to access ExperimentHub resources
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- sug: r-bioc-genomeinfodb (>= 1.40.1)
- BioConductor utilities for manipulating chromosome identifiers
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- sug: r-bioc-genomicranges (>= 1.56.1)
- BioConductor representation and manipulation of genomic intervals
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- sug: r-bioc-iranges (>= 2.38.1)
- GNU R low-level containers for storing sets of integer ranges
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- sug: r-bioc-rsamtools (>= 2.20.0)
- GNU R binary alignment (BAM), variant call (BCF), or tabix file import
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- sug: r-bioc-rtracklayer (>= 1.64.0)
- GNU R interface to genome browsers and their annotation tracks
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- sug: r-bioc-summarizedexperiment (>= 1.34.0)
- BioConductor assay container
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- sug: r-bioc-variantannotation (>= 1.50.0)
- BioConductor annotation of genetic variants
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- sug: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
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- sug: r-cran-rmarkdown
- convert R markdown documents into a variety of formats
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- sug: r-cran-runit
- GNU R package providing unit testing framework