套件：mafft（7.505-1）

[ 原始碼： mafft  ]

Multiple alignment program for amino acid or nucleotide sequences

MAFFT is a multiple sequence alignment program which offers three accuracy-oriented methods:

 * L-INS-i (probably most accurate; recommended for <200 sequences;
   iterative refinement method incorporating local pairwise alignment
   information),
 * G-INS-i (suitable for sequences of similar lengths; recommended for
   <200 sequences; iterative refinement method incorporating global
   pairwise alignment information),
 * E-INS-i (suitable for sequences containing large unalignable regions;
   recommended for <200 sequences),

and five speed-oriented methods:

 * FFT-NS-i (iterative refinement method; two cycles only),
 * FFT-NS-i (iterative refinement method; max. 1000 iterations),
 * FFT-NS-2 (fast; progressive method),
 * FFT-NS-1 (very fast; recommended for >2000 sequences; progressive
   method with a rough guide tree),
 * NW-NS-PartTree-1 (recommended for ∼50,000 sequences; progressive
   method with the PartTree algorithm).

標籤: 生物學: Clustal/ALN, 蛋白質, 領域: field::biology, field::biology:bioinformatics, 實做語言: implemented-in::c, interface::commandline, 角色: 程式, 範圍: 實用程式, Purpose: use::comparing, works-with-format::plaintext, 處理: Biological Sequence

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• dep: libc6 (>= 2.29)

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  同時作為一個虛擬套件由這些套件填實： libc6-udeb

• dep: perl

  Larry Wall's Practical Extraction and Report Language

• rec: blast2

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• rec: libwww-perl

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• rec: lynx

  classic non-graphical (text-mode) web browser

• rec: ruby

  Interpreter of object-oriented scripting language Ruby (default version)

• enh: t-coffee

  Multiple Sequence Alignment

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硬體架構	套件大小	安裝後大小	檔案
ppc64el	1，019。2 kB	16，336。0 kB	[檔案列表]