[ 原始碼： brig ]
套件：brig（0.95+dfsg-3）
BLAST Ring Image Generator
BRIG can display circular comparisons between a large number of genomes, with a focus on handling genome assembly data.
* Images show similarity between a central reference sequence and other sequences as concentric rings. * BRIG will perform all BLAST comparisons and file parsing automatically via a simple GUI. * Contig boundaries and read coverage can be displayed for draft genomes; customized graphs and annotations can be displayed. * Using a user-defined set of genes as input, BRIG can display gene presence, absence, truncation or sequence variation in a set of complete genomes, draft genomes or even raw, unassembled sequence data. * BRIG also accepts SAM-formatted read-mapping files enabling genomic regions present in unassembled sequence data from multiple samples to be compared simultaneously
其他與 brig 有關的套件
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- dep: cgview
- Circular Genome Viewer
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- dep: default-jre
- Standard Java or Java compatible Runtime
- 或者 java6-runtime
- 本虛擬套件由這些套件填實： default-jre, openjdk-17-jre, openjdk-21-jre
- 或者 java7-runtime
- 本虛擬套件由這些套件填實： default-jre, openjdk-17-jre, openjdk-21-jre
- 或者 java8-runtime
- 本虛擬套件由這些套件填實： default-jre, openjdk-17-jre, openjdk-21-jre
- 或者 java9-runtime
- 本虛擬套件由這些套件填實： default-jre, openjdk-17-jre, openjdk-21-jre
- 或者 java10-runtime
- 本虛擬套件由這些套件填實： default-jre, openjdk-17-jre, openjdk-21-jre
- 或者 java11-runtime
- 本虛擬套件由這些套件填實： default-jre, openjdk-17-jre, openjdk-21-jre
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- dep: jarwrapper (>= 0.5)
- Run executable Java .jar files
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- dep: libjdom1-java
- lightweight and fast library using XML
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- dep: libswing-layout-java
- Extensions to Swing layout