[ 原始碼： vdjtools ]
套件：vdjtools（1.2.1+git20190311+repack-2） [non-free]
vdjtools 的相關連結
Debian 的資源：
下載原始碼套件 vdjtools：
- [vdjtools_1.2.1+git20190311+repack-2.dsc]
- [vdjtools_1.2.1+git20190311+repack.orig.tar.gz]
- [vdjtools_1.2.1+git20190311+repack-2.debian.tar.xz]
維護小組：
外部的資源：
- 主頁 [github.com]
相似套件：
framework for post-analysis of B/T cell repertoires
VDJtools is an open-source Java/Groovy-based framework designed to facilitate analysis of immune repertoire sequencing (RepSeq) data. VDJtools computes a wide set of statistics and is able to perform various forms of cross-sample analysis. Both comprehensive tabular output and publication-ready plots are provided.
The main aims of the VDJtools Project are:
* To ensure consistency between post-analysis methods and results * To save the time of bioinformaticians analyzing RepSeq data * To create an API framework facilitating development of new RepSeq analysis applications * To provide a simple enough command line tool so it could be used by immunologists and biologists with little computational background
其他與 vdjtools 有關的套件
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- dep: default-jre
- Standard Java or Java compatible Runtime
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- dep: libvdjtools-java
- Java library of vdjtools
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- rec: r-cran-ape
- GNU R package for Analyses of Phylogenetics and Evolution
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- rec: r-cran-circlize
- Circular Visualization
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- rec: r-cran-ffield
- Force field simulation for a set of points
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- rec: r-cran-ggplot2
- implementation of the Grammar of Graphics
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- rec: r-cran-gplots
- GNU R package with tools for plotting data by Greg Warnes et al
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- rec: r-cran-gridbase
- GNU R Integration of base and grid graphics
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- rec: r-cran-gridextra
- GNU R package with extensions for the grid package
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- rec: r-cran-mass
- GNU R package of Venables and Ripley's MASS
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- rec: r-cran-plotrix
- GNU R package providing various plotting functions
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- rec: r-cran-rcolorbrewer
- GNU R package providing suitable color palettes
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- rec: r-cran-reshape
- Flexibly reshape data
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- rec: r-cran-reshape2
- Flexibly reshape data: a reboot of the reshape package
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- rec: r-cran-scales
- Scale functions for visualization
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- rec: r-cran-venndiagram
- Generate High-Resolution Venn and Euler Plots