原始碼套件:cnvkit(0.9.5-3)
cnvkit 的相關連結
Debian 的資源:
維護小組:
- Debian Med Packaging Team (QA 頁面, 郵件存檔)
- Michael R. Crusoe (QA 頁面)
- Steffen Moeller (QA 頁面)
- Olivier Sallou (QA 頁面)
外部的資源:
- 主頁 [cnvkit.readthedocs.org]
本原始碼套件構建了以下這些二進位制包:
- cnvkit
- Copy number variant detection from targeted DNA sequencing
其他與 cnvkit 有關的套件
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- adep: debhelper (>= 11~)
- helper programs for debian/rules
-
- adep: dh-python
- Debian helper tools for packaging Python libraries and applications
-
- adep: python3-all
- package depending on all supported Python 3 runtime versions
-
- adep: python3-setuptools
- Python3 Distutils Enhancements
-
- adep: python3-pyfaidx
- efficient random access to fasta subsequences for Python 3
-
- adep: help2man
- Automatic manpage generator
-
- adep: python3-biopython
- Python library for bioinformatics (implemented in Python 3)
-
- adep: python3-pandas
- data structures for "relational" or "labeled" data - Python 3
-
- adep: python3-numpy
- Fast array facility to the Python 3 language
-
- adep: python3-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
-
- adep: python3-scipy
- scientific tools for Python 3
-
- adep: python3-matplotlib
- Python based plotting system in a style similar to Matlab (Python 3)
-
- adep: python3-pyvcf
- Variant Call Format (VCF) parser for Python 3
-
- adep: python3-future
- Clean single-source support for Python 3 and 2 - Python 3.x
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- adep: r-bioc-dnacopy
- R package: DNA copy number data analysis
-
- adep: poppler-utils
- PDF utilities (based on Poppler)
Download cnvkit
檔案 | 大小(單位:kB) | MD5 校驗碼 |
---|---|---|
cnvkit_0.9.5-3.dsc | 2。2 kB | 0ec6ad6d1ae6f1ae93b0d39e3f4b6e2a |
cnvkit_0.9.5.orig.tar.gz | 23,101。6 kB | 99bc6756397a38695ff44daeda79ab0d |
cnvkit_0.9.5-3.debian.tar.xz | 5。5 kB | f2cb654fde4bc48e028f8c3bc5048467 |
- Debian 套件原始碼倉庫(VCS:Git)
- https://salsa.debian.org/med-team/cnvkit.git
- Debian 套件原始碼倉庫(可線上瀏覽)
- https://salsa.debian.org/med-team/cnvkit