套件：r-bioc-rtracklayer（1.42.1-2） [debports]
GNU R interface to genome browsers and their annotation tracks
Extensible framework for interacting with multiple genome browsers (currently UCSC built-in) and manipulating annotation tracks in various formats (currently GFF, BED, bedGraph, BED15, WIG, BigWig and 2bit built-in). The user may export/import tracks to/from the supported browsers, as well as query and modify the browser state, such as the current viewport.
其他與 r-bioc-rtracklayer 有關的套件
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- dep: libc6 (>= 2.28)
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb
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- dep: r-api-3.5
- 套件暫時不可用
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- dep: r-api-bioc-3.8
- 套件暫時不可用
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- dep: r-base-core (>= 3.5.2-1)
- GNU R core of statistical computation and graphics system
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- dep: r-bioc-biocgenerics (>= 0.25.1)
- generic functions for Bioconductor
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- dep: r-bioc-biostrings (>= 2.47.6)
- GNU R string objects representing biological sequences
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- dep: r-bioc-genomeinfodb (>= 1.15.2)
- BioConductor utilities for manipulating chromosome identifiers
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- dep: r-bioc-genomicalignments (>= 1.15.6)
- BioConductor representation and manipulation of short genomic alignments
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- dep: r-bioc-genomicranges (>= 1.31.8)
- BioConductor representation and manipulation of genomic intervals
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- dep: r-bioc-iranges (>= 2.13.13)
- GNU R low-level containers for storing sets of integer ranges
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- dep: r-bioc-rsamtools (>= 1.31.2)
- GNU R binary alignment (BAM), variant call (BCF), or tabix file import
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- dep: r-bioc-s4vectors (>= 0.19.22)
- BioConductor S4 implementation of vectors and lists
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- dep: r-bioc-xvector (>= 0.19.7)
- BioConductor representation and manpulation of external sequences
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- dep: r-bioc-zlibbioc
- (Virtual) zlibbioc Bioconductor package
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- dep: r-cran-rcurl (>= 1.4-2)
- GNU R General network (HTTP/FTP/...) client interface
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- dep: r-cran-xml (>= 1.98-0)
- GNU R package for XML parsing and generation
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- dep: zlib1g (>= 1:1.1.4)
- 壓縮函式庫 - 跑程式時用(runtime)
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- sug: r-bioc-bsgenome (>= 1.33.4)
- BioConductor infrastructure for Biostrings-based genome data packages
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- sug: r-bioc-genefilter
- methods for filtering genes from microarray experiments
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- sug: r-bioc-genomicfeatures
- GNU R tools for making and manipulating transcript centric annotations
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- sug: r-bioc-limma
- linear models for microarray data
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- sug: r-cran-runit
- GNU R package providing unit testing framework