套件：grabix（0.1.7-4） [debports]
wee tool for random access into BGZF files
In biomedical research it is increasing practice to study the genetic basis of disease. This now frequently comprises the sequencing of human sequences. The output of the machine however is redundant, and the real sequence is the best sequence to explain the redundancy. The exchange of data happens only with compressed files - to huge and redundant to perform otherwise. One should avoid uncompression whenever possible.
grabix leverages the fantastic BGZF library of the samtools package to provide random access into text files that have been compressed with bgzip. grabix creates it's own index (.gbi) of the bgzipped file. Once indexed, one can extract arbitrary lines from the file with the grab command. Or choose random lines with the, well, random command.
其他與 grabix 有關的套件
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- dep: libc6 (>= 2.34)
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb
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- dep: libgcc-s1 (>= 3.3.1)
- GCC 支援函式庫
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
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- dep: tabix
- generic indexer for TAB-delimited genome position files
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- dep: zlib1g (>= 1:1.2.0)
- 壓縮函式庫 - 跑程式時用(runtime)