套件：r-bioc-variantannotation（1.48.1-1） [debports]
BioConductor annotation of genetic variants
This BioConductor package provides R functions to annotate variants, compute amino acid coding changess and to predict coding outcomes.
其他與 r-bioc-variantannotation 有關的套件
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- dep: libc6 (>= 2.37)
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb
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- dep: libcurl4 (>= 7.18.0)
- easy-to-use client-side URL transfer library (OpenSSL flavour)
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- dep: r-api-4.0
- 本虛擬套件由這些套件填實： r-base-core
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- dep: r-api-bioc-3.18
- 套件暫時不可用
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- dep: r-bioc-annotationdbi (>= 1.27.9)
- GNU R Annotation Database Interface for BioConductor
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- dep: r-bioc-biobase
- base functions for Bioconductor
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- dep: r-bioc-biocgenerics (>= 0.37.0)
- generic functions for Bioconductor
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- dep: r-bioc-biostrings (>= 2.57.2)
- GNU R string objects representing biological sequences
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- dep: r-bioc-bsgenome (>= 1.47.3)
- BioConductor infrastructure for Biostrings-based genome data packages
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- dep: r-bioc-genomeinfodb (>= 1.15.2)
- BioConductor utilities for manipulating chromosome identifiers
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- dep: r-bioc-genomicfeatures (>= 1.31.3)
- GNU R tools for making and manipulating transcript centric annotations
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- dep: r-bioc-genomicranges (>= 1.41.5)
- BioConductor representation and manipulation of genomic intervals
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- dep: r-bioc-iranges (>= 2.23.9)
- GNU R low-level containers for storing sets of integer ranges
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- dep: r-bioc-matrixgenerics
- S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects
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- dep: r-bioc-rhtslib (>= 1.99.3)
- HTSlib high-throughput sequencing library as GNU R package
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- dep: r-bioc-rsamtools (>= 1.99.0)
- GNU R binary alignment (BAM), variant call (BCF), or tabix file import
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- dep: r-bioc-rtracklayer (>= 1.39.7)
- GNU R interface to genome browsers and their annotation tracks
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- dep: r-bioc-s4vectors (>= 0.27.12)
- BioConductor S4 implementation of vectors and lists
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- dep: r-bioc-summarizedexperiment (>= 1.19.5)
- BioConductor assay container
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- dep: r-bioc-xvector (>= 0.29.2)
- BioConductor representation and manpulation of external sequences
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- dep: r-bioc-zlibbioc
- (Virtual) zlibbioc Bioconductor package
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- dep: r-cran-dbi
- GNU R package providing a generic database interface
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- sug: r-bioc-annotationhub
- GNU R client to access AnnotationHub resources
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- sug: r-bioc-biocstyle
- standard styles for vignettes and other Bioconductor documents
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- sug: r-bioc-snpstats
- BioConductor SnpMatrix and XSnpMatrix classes and methods
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- sug: r-cran-ggplot2
- implementation of the Grammar of Graphics
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- sug: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
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- sug: r-cran-runit
- GNU R package providing unit testing framework