全部搜尋項
[  trixie  ] [  sid  ] [  experimental  ]
[ 原始碼： r-bioc-densvis  ]

套件：r-bioc-densvis（1.16.0+dfsg-2 以及其他的）

r-bioc-densvis 的相關連結

Screenshot

Debian 的資源：

下載原始碼套件 r-bioc-densvis：

維護小組：

外部的資源：

相似套件：

density-preserving data visualization via non-linear dimensionality reduction

Implements the density-preserving modification to t-SNE and UMAP described by Narayan et al. (2020) <doi:10.1101/2020.05.12.077776>. The non-linear dimensionality reduction techniques t-SNE and UMAP enable users to summarise complex high-dimensional sequencing data such as single cell RNAseq using lower dimensional representations. These lower dimensional representations enable the visualisation of discrete transcriptional states, as well as continuous trajectory (for example, in early development). However, these methods focus on the local neighbourhood structure of the data. In some cases, this results in misleading visualisations, where the density of cells in the low-dimensional embedding does not represent the transcriptional heterogeneity of data in the original high-dimensional space. den-SNE and densMAP aim to enable more accurate visual interpretation of high-dimensional datasets by producing lower-dimensional embeddings that accurately represent the heterogeneity of the original high-dimensional space, enabling the identification of homogeneous and heterogeneous cell states. This accuracy is accomplished by including in the optimisation process a term which considers the local density of points in the original high-dimensional space. This can help to create visualisations that are more representative of heterogeneity in the original high-dimensional space.

其他與 r-bioc-densvis 有關的套件

  • 依賴
  • 推薦
  • 建議
  • 增強

下載 r-bioc-densvis

下載可用於所有硬體架構的
硬體架構 版本 套件大小 安裝後大小 檔案
alpha （非官方移植版） 1.10.3+dfsg-1 79。3 kB214。0 kB [檔案列表]
amd64 1.16.0+dfsg-2 82。6 kB204。0 kB [檔案列表]
arm64 1.16.0+dfsg-2 77。0 kB216。0 kB [檔案列表]
hppa （非官方移植版） 1.10.3+dfsg-1 81。8 kB212。0 kB [檔案列表]
ia64 （非官方移植版） 1.10.3+dfsg-1 92。0 kB305。0 kB [檔案列表]
m68k （非官方移植版） 1.10.3+dfsg-1 77。7 kB189。0 kB [檔案列表]
ppc64 （非官方移植版） 1.10.3+dfsg-1 86。1 kB281。0 kB [檔案列表]
sh4 （非官方移植版） 1.10.3+dfsg-1 87。3 kB213。0 kB [檔案列表]
sparc64 （非官方移植版） 1.10.3+dfsg-1 74。3 kB1，115。0 kB [檔案列表]
x32 （非官方移植版） 1.10.3+dfsg-1 80。8 kB193。0 kB [檔案列表]