套件：r-cran-adegenet（2.1.10-1） [debports]
GNU R exploratory analysis of genetic and genomic data
Toolset for the exploration of genetic and genomic data. Adegenet provides formal (S4) classes for storing and handling various genetic data, including genetic markers with varying ploidy and hierarchical population structure ('genind' class), alleles counts by populations ('genpop'), and genome-wide SNP data ('genlight'). It also implements original multivariate methods (DAPC, sPCA), graphics, statistical tests, simulation tools, distance and similarity measures, and several spatial methods. A range of both empirical and simulated datasets is also provided to illustrate various methods.
其他與 r-cran-adegenet 有關的套件
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- dep: libc6 (>= 2.4)
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb
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- dep: r-api-4.0
- 本虛擬套件由這些套件填實： r-base-core
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- dep: r-base-core (>= 4.2.2.20221110-2)
- GNU R core of statistical computation and graphics system
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- dep: r-cran-ade4
- GNU R analysis of ecological data
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- dep: r-cran-ape
- GNU R package for Analyses of Phylogenetics and Evolution
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- dep: r-cran-boot
- GNU R package for bootstrapping functions from Davison and Hinkley
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- dep: r-cran-dplyr (>= 0.4.1)
- GNU R grammar of data manipulation
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- dep: r-cran-ggplot2
- implementation of the Grammar of Graphics
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- dep: r-cran-igraph
- GNU R network analysis and visualization
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- dep: r-cran-mass
- GNU R package of Venables and Ripley's MASS
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- dep: r-cran-reshape2
- Flexibly reshape data: a reboot of the reshape package
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- dep: r-cran-seqinr
- GNU R biological sequences retrieval and analysis
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- dep: r-cran-shiny
- GNU R web application framework
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- dep: r-cran-vegan
- Community Ecology Package for R
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- rec: r-cran-testthat
- GNU R testsuite
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- sug: r-cran-interp
- GNU R interpolation methods
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- sug: r-cran-maps
- GNU R support for producing geographic maps
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- sug: r-cran-spdep
- GNU R spatial dependence: weighting schemes, statistics and models