套件：r-bioc-oligo（1.68.2+ds-1） [debports]

[ 原始碼：  ]

Preprocessing tools for oligonucleotide arrays

A package to analyze oligonucleotide arrays (expression/SNP/tiling/exon) at probe-level. It currently supports Affymetrix (CEL files) and NimbleGen arrays (XYS files).

其他與 r-bioc-oligo 有關的套件

• dep: libc6 (>= 2.29)

  GNU C 函式庫：共用函式庫
  同時作為一個虛擬套件由這些套件填實： libc6-udeb

• dep: r-api-4.0

  本虛擬套件由這些套件填實： r-base-core

• dep: r-api-bioc-3.19

  本虛擬套件由這些套件填實： r-bioc-biocgenerics

• dep: r-bioc-affxparser (>= 1.76.0)

  Affymetrix File Parsing SDK

• dep: r-bioc-affyio (>= 1.74.0)

  BioConductor tools for parsing Affymetrix data files

• dep: r-bioc-biobase (>= 2.64.0)

  base functions for Bioconductor

• dep: r-bioc-biocgenerics (>= 0.50.0)

  generic functions for Bioconductor

• dep: r-bioc-biostrings (>= 2.72.1)

  GNU R string objects representing biological sequences

• dep: r-bioc-oligoclasses (>= 1.66.0)

  Classes for high-throughput arrays supported by oligo and crlmm

• dep: r-bioc-preprocesscore (>= 1.66.0)

  BioConductor collection of pre-processing functions

• dep: r-bioc-zlibbioc (>= 1.50.0)

  (Virtual) zlibbioc Bioconductor package

• dep: r-cran-dbi (>= 0.3.1)

  GNU R package providing a generic database interface

• dep: r-cran-ff

  Memory-Efficient Fast-Access Storage of Large Data

• dep: r-cran-rsqlite (>= 1.0.0)

  Database Interface R driver for SQLite

• dep: zlib1g (>= 1:1.1.4)

  壓縮函式庫 - 跑程式時用(runtime)

• sug: r-bioc-annotationdbi (>= 1.66.0)

  GNU R Annotation Database Interface for BioConductor

• sug: r-bioc-biocstyle (>= 2.32.1)

  standard styles for vignettes and other Bioconductor documents

• sug: r-bioc-biomart (>= 2.60.1)

  GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)

• sug: r-bioc-genefilter (>= 1.86.0)

  methods for filtering genes from microarray experiments

• sug: r-bioc-limma (>= 3.60.3)

  linear models for microarray data

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-rcolorbrewer

  GNU R package providing suitable color palettes

• sug: r-cran-rcurl

  GNU R General network (HTTP/FTP/...) client interface

• sug: r-cran-runit

  GNU R package providing unit testing framework

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硬體架構	套件大小	安裝後大小	檔案
ppc64 （非官方移植版）	901。4 kB	1，417。0 kB	[檔案列表]