套件：r-bioc-oligo（1.66.0+ds-1） [debports]
Preprocessing tools for oligonucleotide arrays
A package to analyze oligonucleotide arrays (expression/SNP/tiling/exon) at probe-level. It currently supports Affymetrix (CEL files) and NimbleGen arrays (XYS files).
其他與 r-bioc-oligo 有關的套件
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- dep: libc6.1 (>= 2.37)
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6.1-udeb
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- dep: r-api-4.0
- 本虛擬套件由這些套件填實： r-base-core
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- dep: r-api-bioc-3.18
- 套件暫時不可用
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- dep: r-bioc-affxparser (>= 1.39.4)
- Affymetrix File Parsing SDK
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- dep: r-bioc-affyio (>= 1.35.0)
- BioConductor tools for parsing Affymetrix data files
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- dep: r-bioc-biobase (>= 2.27.3)
- base functions for Bioconductor
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- dep: r-bioc-biocgenerics (>= 0.13.11)
- generic functions for Bioconductor
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- dep: r-bioc-biostrings (>= 2.35.12)
- GNU R string objects representing biological sequences
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- dep: r-bioc-oligoclasses (>= 1.29.6)
- Classes for high-throughput arrays supported by oligo and crlmm
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- dep: r-bioc-preprocesscore (>= 1.29.0)
- BioConductor collection of pre-processing functions
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- dep: r-bioc-zlibbioc
- (Virtual) zlibbioc Bioconductor package
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- dep: r-cran-dbi (>= 0.3.1)
- GNU R package providing a generic database interface
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- dep: r-cran-ff
- Memory-Efficient Fast-Access Storage of Large Data
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- dep: r-cran-rsqlite (>= 1.0.0)
- Database Interface R driver for SQLite
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- dep: zlib1g (>= 1:1.1.4)
- 壓縮函式庫 - 跑程式時用(runtime)
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- sug: r-bioc-annotationdbi
- GNU R Annotation Database Interface for BioConductor
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- sug: r-bioc-biocstyle
- standard styles for vignettes and other Bioconductor documents
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- sug: r-bioc-biomart
- GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)
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- sug: r-bioc-genefilter
- methods for filtering genes from microarray experiments
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- sug: r-bioc-limma
- linear models for microarray data
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- sug: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
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- sug: r-cran-rcolorbrewer
- GNU R package providing suitable color palettes
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- sug: r-cran-rcurl
- GNU R General network (HTTP/FTP/...) client interface
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- sug: r-cran-runit
- GNU R package providing unit testing framework