[ 原始碼： sumatra ]
套件：sumatra（1.0.36+ds-2）
sumatra 的相關連結
Debian 的資源：
下載原始碼套件 sumatra：
維護小組：
- Debian Med Packaging Team (QA 頁面, 郵件存檔)
- Tim Booth (QA 頁面)
- Andreas Tille (QA 頁面)
- Pierre Gruet (QA 頁面)
外部的資源：
- 主頁 [metabarcoding.org]
相似套件：
fast and exact comparison and clustering of sequences
With the development of next-generation sequencing, efficient tools are needed to handle millions of sequences in reasonable amounts of time. Sumatra is a program developed by the LECA. Sumatra aims to compare sequences in a way that is fast and exact at the same time. This tool has been developed to be adapted to the type of data generated by DNA metabarcoding, i.e. entirely sequenced, short markers. Sumatra computes the pairwise alignment scores from one dataset or between two datasets, with the possibility to specify a similarity threshold under which pairs of sequences that have a lower similarity are not reported. The output can then go through a classification process with programs such as MCL or MOTHUR.
其他與 sumatra 有關的套件
|
|
|
|
-
- dep: libc6 (>= 2.7)
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb
-
- dep: libsuma1 (>= 1.0.35)
- shared library for sumatra and sumaclust