套件:cp2k(2023.2-2 以及其他的)
Ab Initio Molecular Dynamics
CP2K is a program to perform simulations of solid state, liquid, molecular and biological systems. It is especially aimed at massively parallel and linear scaling electronic structure methods and state-of-the-art ab-initio molecular dynamics (AIMD) simulations.
CP2K is optimized for the mixed Gaussian and Plane-Waves (GPW) method based on pseudopotentials, but is able to run all-electron or pure plane-wave/Gaussian calculations as well. Features include:
Ab-initio Electronic Structure Theory Methods using the QUICKSTEP module:
* Density-Functional Theory (DFT) energies and forces * Hartree-Fock (HF) energies and forces * Moeller-Plesset 2nd order perturbation theory (MP2) energies and forces * Random Phase Approximation (RPA) energies * Gas phase or Periodic boundary conditions (PBC) * Basis sets include various standard Gaussian-Type Orbitals (GTOs), Pseudo- potential plane-waves (PW), and a mixed Gaussian and (augmented) plane wave approach (GPW/GAPW) * Norm-conserving, seperable Goedecker-Teter-Hutter (GTH) and non-linear core corrected (NLCC) pseudopotentials, or all-electron calculations * Local Density Approximation (LDA) XC functionals including SVWN3, SVWN5, PW92 and PADE * Gradient-corrected (GGA) XC functionals including BLYP, BP86, PW91, PBE and HCTH120 as well as the meta-GGA XC functional TPSS * Hybrid XC functionals with exact Hartree-Fock Exchange (HFX) including B3LYP, PBE0 and MCY3 * Double-hybrid XC functionals including B2PLYP and B2GPPLYP * Additional XC functionals via LibXC * Dispersion corrections via DFT-D2 and DFT-D3 pair-potential models * Non-local van der Waals corrections for XC functionals including B88-vdW, PBE-vdW and B97X-D * DFT+U (Hubbard) correction * Density-Fitting for DFT via Bloechl or Density Derived Atomic Point Charges (DDAPC) charges, for HFX via Auxiliary Density Matrix Methods (ADMM) and for MP2/RPA via Resolution-of-identity (RI) * Sparse matrix and prescreening techniques for linear-scaling Kohn-Sham (KS) matrix computation * Orbital Transformation (OT) or Direct Inversion of the iterative subspace (DIIS) self-consistent field (SCF) minimizer * Local Resolution-of-Identity Projector Augmented Wave method (LRIGPW) * Absolutely Localized Molecular Orbitals SCF (ALMO-SCF) energies for linear scaling of molecular systems * Excited states via time-dependent density-functional perturbation theory (TDDFPT)
Ab-initio Molecular Dynamics:
* Born-Oppenheimer Molecular Dynamics (BOMD) * Ehrenfest Molecular Dynamics (EMD) * PS extrapolation of initial wavefunction * Time-reversible Always Stable Predictor-Corrector (ASPC) integrator * Approximate Car-Parrinello like Langevin Born-Oppenheimer Molecular Dynamics (Second-Generation Car-Parrinello Molecular Dynamics (SGCP))
Mixed quantum-classical (QM/MM) simulations:
* Real-space multigrid approach for the evaluation of the Coulomb interactions between the QM and the MM part * Linear-scaling electrostatic coupling treating of periodic boundary conditions * Adaptive QM/MM
Further Features include:
* Single-point energies, geometry optimizations and frequency calculations * Several nudged-elastic band (NEB) algorithms (B-NEB, IT-NEB, CI-NEB, D-NEB) for minimum energy path (MEP) calculations * Global optimization of geometries * Solvation via the Self-Consistent Continuum Solvation (SCCS) model * Semi-Empirical calculations including the AM1, RM1, PM3, MNDO, MNDO-d, PNNL and PM6 parametrizations, density-functional tight-binding (DFTB) and self-consistent-polarization tight-binding (SCP-TB), with or without periodic boundary conditions * Classical Molecular Dynamics (MD) simulations in microcanonical ensemble (NVE) or canonical ensmble (NVT) with Nose-Hover and canonical sampling through velocity rescaling (CSVR) thermostats * Metadynamics including well-tempered Metadynamics for Free Energy calculations * Classical Force-Field (MM) simulations * Monte-Carlo (MC) KS-DFT simulations * Static (e.g. spectra) and dynamical (e.g. diffusion) properties * ATOM code for pseudopotential generation * Integrated molecular basis set optimization
CP2K does not implement conventional Car-Parrinello Molecular Dynamics (CPMD).
其他與 cp2k 有關的套件
|
|
|
|
-
- dep: cp2k-data (= 2023.1-2) [ia64, riscv64, sparc64]
- Ab Initio Molecular Dynamics (data files)
- dep: cp2k-data (= 2023.2-2) [除 hppa, ia64, riscv64, sparc64]
- dep: cp2k-data (= 5.1-3) [hppa]
-
- dep: libblacs-openmpi1 [hppa]
- 套件暫時不可用
-
- dep: libblas3
- Basic Linear Algebra Reference implementations, shared library
- 或者 libblas.so.3
- 本虛擬套件由這些套件填實: libatlas3-base, libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
-
- dep: libc6 (>= 2.11) [hppa]
- GNU C 函式庫:共用函式庫
同時作為一個虛擬套件由這些套件填實: libc6-udeb
- dep: libc6 (>= 2.34) [除 alpha, amd64, hppa, ia64, sh4, x32]
- dep: libc6 (>= 2.35) [amd64, x32]
- dep: libc6 (>= 2.37) [sh4]
-
- dep: libc6.1 (>= 2.34) [alpha]
- GNU C 函式庫:共用函式庫
同時作為一個虛擬套件由這些套件填實: libc6.1-udeb
- dep: libc6.1 (>= 2.36) [ia64]
-
- dep: libelpa19 (>= 2022.11.001) [除 hppa]
- Eigenvalue SoLvers for Petaflop-Applications
-
- dep: libelpa4 (>= 2013.11.008) [hppa]
- 套件暫時不可用
-
- dep: libevent-core-2.1-7 (>= 2.1.8-stable) [sparc64]
- Asynchronous event notification library (core)
-
- dep: libevent-pthreads-2.1-7 (>= 2.1.8-stable) [sparc64]
- Asynchronous event notification library (pthreads)
-
- dep: libfftw3-double3 (>= 3.3.10) [除 hppa]
- Library for computing Fast Fourier Transforms - Double precision
- dep: libfftw3-double3 (>= 3.3.5) [hppa]
-
- dep: libgcc-s1 (>= 4.0) [除 hppa, i386, ia64]
- GCC 支援函式庫
- dep: libgcc-s1 (>= 4.2) [ia64]
- dep: libgcc-s1 (>= 7) [i386]
-
- dep: libgcc4 (>= 4.1.1) [hppa]
- 套件暫時不可用
-
- dep: libgfortran4 (>= 7) [hppa]
- 套件暫時不可用
-
- dep: libgfortran5 (>= 10) [除 hppa]
- Runtime library for GNU Fortran applications
-
- dep: libgomp1 (>= 6) [除 hppa]
- GCC OpenMP (GOMP) support library
-
- dep: libhwloc15 (>= 2.9.0) [sparc64]
- Hierarchical view of the machine - shared libs
-
- dep: libint1 [hppa]
- Evaluate the integrals in modern atomic and molecular theory
-
- dep: libint2-2 [除 hppa]
- Computation Chemistry Integral Evaluation Library
-
- dep: liblapack3
- Library of linear algebra routines 3 - shared version
- 或者 liblapack.so.3
- 本虛擬套件由這些套件填實: libatlas3-base, liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
-
- dep: libopenmpi2 [hppa]
- 套件暫時不可用
-
- dep: libopenmpi3 (>= 4.1.4) [ia64, riscv64, sparc64]
- high performance message passing library -- shared library
- dep: libopenmpi3 (>= 4.1.6) [除 hppa, ia64, riscv64, sparc64]
-
- dep: libscalapack-openmpi2.0 [hppa]
- 套件暫時不可用
-
- dep: libscalapack-openmpi2.2 (>= 2.2.1) [除 hppa]
- Scalable Linear Algebra Package - Shared libs for OpenMPI
-
- dep: libstdc++6 (>= 4.1.1) [sparc64]
- GNU Standard C++ Library v3
-
- dep: libsymspg1 (>= 1.16.0) [ia64]
- C library for crystal symmetry determination
- dep: libsymspg1 (>= 2.0.2-1+b2) [riscv64, sparc64]
-
- dep: libsymspg2 (>= 2.1.0) [除 hppa, ia64, riscv64, sparc64]
- C library for crystal symmetry determination
-
- dep: libxc4 (>= 3.0.0) [hppa]
- 套件暫時不可用
-
- dep: libxc9 (>= 5.1.6) [除 hppa]
- Library of Exchange-Correlation Functionals
-
- dep: zlib1g (>= 1:1.1.4) [sparc64]
- 壓縮函式庫 - 跑程式時用(runtime)
下載 cp2k
硬體架構 | 版本 | 套件大小 | 安裝後大小 | 檔案 |
---|---|---|---|---|
alpha (非官方移植版) | 2023.2-2 | 18,175。8 kB | 48,742。0 kB | [檔案列表] |
amd64 | 2023.2-2 | 17,062。2 kB | 54,881。0 kB | [檔案列表] |
arm64 | 2023.2-2 | 16,287。6 kB | 39,531。0 kB | [檔案列表] |
armel | 2023.2-2 | 15,753。2 kB | 48,081。0 kB | [檔案列表] |
armhf | 2023.2-2 | 14,220。8 kB | 31,765。0 kB | [檔案列表] |
hppa (非官方移植版) | 5.1-3 | 25,363。8 kB | 61,676。0 kB | [檔案列表] |
i386 | 2023.2-2 | 14,210。8 kB | 53,651。0 kB | [檔案列表] |
ia64 (非官方移植版) | 2023.1-2 | 28,499。7 kB | 96,469。0 kB | [檔案列表] |
mips64el | 2023.2-2 | 16,593。6 kB | 48,572。0 kB | [檔案列表] |
ppc64 (非官方移植版) | 2023.2-2 | 17,266。4 kB | 47,283。0 kB | [檔案列表] |
ppc64el | 2023.2-2 | 18,716。1 kB | 47,979。0 kB | [檔案列表] |
riscv64 (非官方移植版) | 2023.1-2 | 18,567。4 kB | 36,781。0 kB | [檔案列表] |
s390x | 2023.2-2 | 14,399。9 kB | 50,835。0 kB | [檔案列表] |
sh4 (非官方移植版) | 2023.2-2 | 19,119。0 kB | 39,238。0 kB | [檔案列表] |
sparc64 (非官方移植版) | 2023.1-2 | 15,115。6 kB | 41,119。0 kB | [檔案列表] |
x32 (非官方移植版) | 2023.2-2 | 16,842。6 kB | 53,258。0 kB | [檔案列表] |