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[ 原始碼: sibsim4  ]

套件:sibsim4(0.20-5)

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align expressed RNA sequences on a DNA template

The SIBsim4 project is based on sim4, which is a program designed to align an expressed DNA sequence with a genomic sequence, allowing for introns. SIBsim4 is a fairly extensive rewrite of the original code with the following goals:

 * speed improvement;
 * allow large, chromosome scale, DNA sequences to be used;
 * provide more detailed output about splice types;
 * provide more detailed output about polyA sites;
 * misc code cleanups and fixes.

標籤: 領域: 生物學, 生物資訊學, 實做語言: implemented-in::c, interface::commandline, 角色: 程式, 範圍: 實用程式, Purpose: use::TODO, use::comparing, 搜尋, 支援的格式: works-with-format::TODO, works-with-format::plaintext, 處理: 需要一個額外的標籤

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armel 27。5 kB72。0 kB [檔案列表]