套件：maq（0.7.1-10）

[ 原始碼： maq  ]

maps short fixed-length polymorphic DNA sequence reads to reference sequences

Maq (short for Mapping and Assembly with Quality) builds mapping assemblies from short reads generated by the next-generation sequencing machines. It was particularly designed for Illumina-Solexa 1G Genetic Analyzer, and has a preliminary functionality to handle ABI SOLiD data. Maq is previously known as mapass2.

Developmemt of Maq stopped in 2008. Its successors are BWA and SAMtools.

標籤: 領域: 生物學, 生物資訊學, 實做語言: implemented-in::c++, implemented-in::perl, 使用者介面: 命令行, 角色: role::program, scope::utility, Purpose: 需要一個額外的標籤, Analysing, use::comparing, use::searching, 支援的格式: 需要一個額外的標籤, works-with-format::plaintext, works-with::TODO

其他與 maq 有關的套件

• dep: libc6 (>= 2.38)

  GNU C 函式庫：共用函式庫
  同時作為一個虛擬套件由這些套件填實： libc6-udeb

• dep: libgcc-s1 (>= 3.5)

  GCC 支援函式庫

• dep: libstdc++6 (>= 5)

  GNU Standard C++ Library v3

• dep: zlib1g (>= 1:1.2.3.3)

  壓縮函式庫 - 跑程式時用(runtime)

• sug: bwa

  Burrows-Wheeler Aligner

• sug: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

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硬體架構	套件大小	安裝後大小	檔案
armel	284。3 kB	524。0 kB	[檔案列表]