[ 原始碼： last-align ]
套件：last-align（1542-1 以及其他的）
last-align 的相關連結
Debian 的資源：
下載原始碼套件 last-align：
維護小組：
- Debian Med Packaging Team (QA 頁面, 郵件存檔)
- Charles Plessy (QA 頁面)
- Andreas Tille (QA 頁面)
- Nilesh Patra (QA 頁面)
外部的資源：
- 主頁 [gitlab.com]
相似套件：
genome-scale comparison of biological sequences
LAST is software for comparing and aligning sequences, typically DNA or protein sequences. LAST is similar to BLAST, but it copes better with very large amounts of sequence data. Here are two things LAST is good at:
* Comparing large (e.g. mammalian) genomes. * Mapping lots of sequence tags onto a genome.
The main technical innovation is that LAST finds initial matches based on their multiplicity, instead of using a fixed size (e.g. BLAST uses 10-mers). This allows one to map tags to genomes without repeat-masking, without becoming overwhelmed by repetitive hits. To find these variable-sized matches, it uses a suffix array (inspired by Vmatch). To achieve high sensitivity, it uses a discontiguous suffix array, analogous to spaced seeds.
其他與 last-align 有關的套件
|
|
|
|
-
- dep: libc6 (>= 2.38)
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb
-
- dep: libgcc-s1 (>= 3.5)
- GCC 支援函式庫
-
- dep: libstdc++6 (>= 13.1)
- GNU Standard C++ Library v3
-
- dep: python3
- interactive high-level object-oriented language (default python3 version)
-
- dep: zlib1g (>= 1:1.2.3.3)
- 壓縮函式庫 - 跑程式時用(runtime)
-
- rec: parallel
- build and execute command lines from standard input in parallel
-
- rec: python3-pil
- Python Imaging Library (Python3)