[ 原始碼: ggd-utils ]
套件:golang-github-gogetdata-ggd-utils-dev(1.0.0+ds-1)
golang-github-gogetdata-ggd-utils-dev 的相關連結
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下載原始碼套件 ggd-utils:
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外部的資源:
- 主頁 [github.com]
相似套件:
library for use in ggd
Takes a genome file and (currently) a .vcf.gz or a .bed.gz and checks that:
* a .tbi is present * the VCF has ""##fileformat=VCF" as the first line * the VCF has a #CHROM header * the chromosome are in the order specified by the genome file (and present) * the positions are sorted * the positions are <= the chromosome lengths defined in the genome file.
As a result, any new genome going into GGD will have a .genome file that will dictate the sort order and presence or absence of the 'chr' prefix for chromosomes
This is the library package for ggd-utils