套件：ampliconnoise（1.29-13） [debports]
removal of noise from 454 sequenced PCR amplicons
AmpliconNoise is a package of applications to clean up high-throughput sequence data. It consists of three main parts:
Pyronoise - does flowgram-based clustering to spot misreads SeqNoise - removes PCR point mutations Perseus - removes PCR chimeras without the need for a set of reference sequences
Previously there was a standalone "Pyronoise" by the same authors and this package includes an updated version. There is also a "Denoiser" in Qiime which is related but distinct.
其他與 ampliconnoise 有關的套件
|
|
|
|
-
- dep: libc6.1 (>= 2.34)
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6.1-udeb
-
- dep: libgsl28 (>= 2.8+dfsg)
- GNU Scientific Library (GSL) -- library package
-
- dep: libopenmpi3t64 (>= 4.1.6)
- high performance message passing library -- shared library
-
- dep: mafft
- Multiple alignment program for amino acid or nucleotide sequences
-
- rec: openmpi-bin
- high performance message passing library -- binaries