[ 原始碼： beagle ]
套件：beagle（220722-1）
Genotype calling, genotype phasing and imputation of ungenotyped markers
Beagle performs genotype calling, genotype phasing, imputation of ungenotyped markers, and identity-by-descent segment detection. Genotypic imputation works on phased haplotypes using a Li and Stephens haplotype frequency model. Beagle also implements the Refined IBD algorithm for detecting homozygosity-by-descent (HBD) and identity-by-descent (IBD) segments.
其他與 beagle 有關的套件
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- dep: default-jre
- Standard Java or Java compatible Runtime
- 或者 java11-runtime
- 本虛擬套件由這些套件填實： default-jre, openjdk-11-jre, openjdk-17-jre, openjdk-19-jre, openjdk-20-jre, openjdk-21-jre, openjdk-22-jre, openjdk-23-jre
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- dep: libhtsjdk-java
- Java API for high-throughput sequencing data (HTS) formats
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- sug: beagle-doc
- Documentation for Beagle