[ 原始碼： snakemake ]
套件：snakemake（5.4.0-1）
pythonic workflow management system
Build systems like GNU Make are frequently used to create complicated workflows, e.g. in bioinformatics. This project aims to reduce the complexity of creating workflows by providing a clean and modern domain specific language (DSL) in Python style, together with a fast and comfortable execution environment.
其他與 snakemake 有關的套件
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- dep: ca-certificates
- Common CA certificates
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- dep: libjs-d3
- JavaScript visualization library for HTML and SVG
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- dep: libjs-mathjax
- JavaScript display engine for LaTeX and MathML
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- dep: libjs-sphinxdoc (>= 1.0)
- JavaScript support for Sphinx documentation
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-appdirs
- determining appropriate platform-specific directories (Python 3)
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- dep: python3-configargparse
- replacement for argparse with config files and environment variables (Python 3)
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- dep: python3-datrie
- Super-fast, efficiently stored Trie for Python 3
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- dep: python3-docutils
- text processing system for reStructuredText (implemented in Python 3)
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- dep: python3-git
- Python library to interact with Git repositories - Python 3.x
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- dep: python3-jsonschema
- An(other) implementation of JSON Schema (Draft 3 and 4) - Python 3.x
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- dep: python3-networkx
- tool to create, manipulate and study complex networks (Python3)
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- dep: python3-psutil
- module providing convenience functions for managing processes (Python3)
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- dep: python3-pygraphviz
- Python interface to the Graphviz graph layout and visualization package (Python 3)
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- dep: python3-pytools
- big bag of things supplementing Python 3 standard library
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- dep: python3-ratelimiter
- simple Python library for limiting the rate of operations
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- dep: python3-recommonmark
- CommonMark utility for Docutils and Sphinx projects -- Python 3
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- dep: python3-requests
- elegant and simple HTTP library for Python3, built for human beings
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- dep: python3-rpy2
- Python3 interface to the GNU R language and environment (version 2)
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- dep: python3-setuptools
- Python3 Distutils Enhancements
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- dep: python3-wrapt
- decorators, wrappers and monkey patching. - Python 3.x
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- dep: python3-yaml
- YAML parser and emitter for Python3
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- dep: sphinx-rtd-theme-common (>= 0.4.2+dfsg)
- sphinx theme from readthedocs.org (common files)
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- rec: python3-boto
- Python interface to Amazon's Web Services - Python 3.x
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- rec: r-cran-rmarkdown
- convert R markdown documents into a variety of formats