[ 原始碼： libvcflib ]
套件：libvcflib-tools（1.0.0~rc2+dfsg-2）
libvcflib-tools 的相關連結
Debian 的資源：
下載原始碼套件 libvcflib：
- [libvcflib_1.0.0~rc2+dfsg-2.dsc]
- [libvcflib_1.0.0~rc2+dfsg.orig.tar.xz]
- [libvcflib_1.0.0~rc2+dfsg-2.debian.tar.xz]
維護小組：
外部的資源：
- 主頁 [github.com]
相似套件：
C++ library for parsing and manipulating VCF files (tools)
The Variant Call Format (VCF) is a flat-file, tab-delimited textual format intended to concisely describe reference-indexed variations between individuals. VCF provides a common interchange format for the description of variation in individuals and populations of samples, and has become the defacto standard reporting format for a wide array of genomic variant detectors.
vcflib provides methods to manipulate and interpret sequence variation as it can be described by VCF. It is both:
* an API for parsing and operating on records of genomic variation as it can be described by the VCF format, * and a collection of command-line utilities for executing complex manipulations on VCF files.
This package contains several tools using the library.
其他與 libvcflib-tools 有關的套件
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- dep: libbz2-1.0
- high-quality block-sorting file compressor library - runtime
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- dep: libc6 (>= 2.23)
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb
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- dep: libdisorder0 (>= 0.0.2)
- library for entropy measurement of byte streams
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- dep: libfastahack0 (>= 0.0+git20160702.bbc645f)
- library for indexing and sequence extraction from FASTA files (lib)
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- dep: libgcc1 (>= 1:3.0)
- GCC 支援函式庫
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- dep: libhts2 (>= 1.0)
- C library for high-throughput sequencing data formats
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- dep: liblzma5 (>= 5.1.1alpha+20110809)
- XZ-format compression library
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- dep: libsmithwaterman0 (>= 0.0+git20160702.2610e25)
- determine similar regions between two strings or genomic sequences (lib)
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
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- dep: libtabixpp0
- C++ wrapper to tabix indexer
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- dep: libvcflib1
- C++ library for parsing and manipulating VCF files
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- dep: python
- interactive high-level object-oriented language (Python2 version)
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- dep: r-base-core
- GNU R core of statistical computation and graphics system
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- dep: r-cran-ggplot2
- implementation of the Grammar of Graphics
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- dep: r-cran-gridbase
- GNU R Integration of base and grid graphics
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- dep: r-cran-plyr
- tools for splitting, applying and combining data
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- dep: zlib1g (>= 1:1.1.4)
- 壓縮函式庫 - 跑程式時用(runtime)
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- sug: r-cran-pracma
- practical numerical math functions for GNU R