[ 原始碼： metastudent ]
套件：metastudent（2.0.1-6）
predictor of Gene Ontology terms from protein sequence
Often, only the sequence of a protein is known, but not its functions. Metastudent will try to predict missing functional annotations through homology searches (BLAST).
All predicted functions correspond to Gene Ontology (GO) terms from the Molecular Function (MFO), the Biological Process (BPO) and the Cellular Component Ontology (CCO) and are associated with a reliability score.
其他與 metastudent 有關的套件
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- dep: blast2
- transitional dummy package to ncbi-blast+-legacy
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- dep: default-jre
- Standard Java or Java compatible Runtime
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- dep: libfile-chdir-perl
- more sensible way to change directories
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- dep: libgo-perl (>= 0.15-3)
- perl modules for GO and other OBO ontologies
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- dep: libgraphviz-perl
- Perl interface to the GraphViz graphing tool
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- dep: libipc-run-perl
- Perl module for running processes
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- dep: metastudent-data (>= 2.0.0)
- predictor of Gene Ontology terms from protein sequence - data files
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- dep: perl
- Larry Wall's Practical Extraction and Report Language
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- dep: python
- interactive high-level object-oriented language (Python2 version)