[ 原始碼： mapdamage ]
套件：mapdamage（2.0.9+dfsg-1）
mapdamage 的相關連結
Debian 的資源：
下載原始碼套件 mapdamage：
- [mapdamage_2.0.9+dfsg-1.dsc]
- [mapdamage_2.0.9+dfsg.orig.tar.xz]
- [mapdamage_2.0.9+dfsg-1.debian.tar.xz]
維護小組：
外部的資源：
- 主頁 [ginolhac.github.io]
相似套件：
tracking and quantifying damage patterns in ancient DNA sequences
MapDamage is a computational framework written in Python and R, which tracks and quantifies DNA damage patterns among ancient DNA sequencing reads generated by Next-Generation Sequencing platforms.
MapDamage is developed at the Centre for GeoGenetics by the Orlando Group.
其他與 mapdamage 有關的套件
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- dep: libopenblas-dev
- Optimized BLAS (linear algebra) library (development files)
- 或者 libblas-dev
- Basic Linear Algebra Subroutines 3, static library
- 或者 libatlas-base-dev
- Automatically Tuned Linear Algebra Software, generic static
- 或者 libblas.so
- 本虛擬套件由這些套件填實： libatlas-base-dev, libblas-dev, libblis-openmp-dev, libblis-pthread-dev, libblis-serial-dev, libopenblas-dev
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- dep: libopenblas-dev
- Optimized BLAS (linear algebra) library (development files)
- 或者 liblapack-dev
- Library of linear algebra routines 3 - static version
- 或者 libatlas-base-dev
- Automatically Tuned Linear Algebra Software, generic static
- 或者 liblapack.so
- 本虛擬套件由這些套件填實： libatlas-base-dev, liblapack-dev, libopenblas-dev
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- dep: python
- interactive high-level object-oriented language (Python2 version)
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- dep: python-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 2)
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- dep: r-base-core
- GNU R core of statistical computation and graphics system
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- dep: r-cran-gam
- Generalized Additive Models for R
-
- dep: r-cran-ggplot2
- implementation of the Grammar of Graphics
-
- dep: r-cran-inline
- GNU R package to inline C, C++, Fortran functions from R
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- dep: r-cran-rcpp
- GNU R package for Seamless R and C++ Integration
-
- dep: r-cran-rcppgsl
- GNU R package for integration with the GNU GSL
-
- dep: seqtk
- Fast and lightweight tool for processing sequences in the FASTA or FASTQ format