[ 原始碼： murasaki ]
套件：murasaki（1.68.6-8 以及其他的）
homology detection tool across multiple large genomes
Murasaki is a scalable and fast, language theory-based homology detection tool across multiple large genomes. It enable whole-genome scale multiple genome global alignments. Supports unlimited length gapped-seed patterns and unique TF-IDF based filtering.
Murasaki is an anchor alignment software, which is
* exteremely fast (17 CPU hours for whole Human x Mouse genome (with 40 nodes: 52 wall minutes)) * scalable (Arbitrarily parallelizable across multiple nodes using MPI. Even a single node with 16GB of ram can handle over 1Gbp of sequence.) * unlimited pattern length * repeat tolerant * intelligent noise reduction
其他與 murasaki 有關的套件
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- dep: libboost-filesystem1.67.0
- filesystem operations (portable paths, iteration over directories, etc) in C++
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- dep: libboost-iostreams1.67.0
- Boost.Iostreams Library
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- dep: libboost-regex1.67.0 (>= 1.67.0-10)
- regular expression library for C++
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- dep: libboost-system1.67.0
- Operating system (e.g. diagnostics support) library
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- dep: libc6 (>= 2.14)
- GNU C 函式庫：共用函式庫
同時作為一個虛擬套件由這些套件填實： libc6-udeb
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- dep: libcrypto++6
- General purpose cryptographic library - shared library
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- dep: libgcc1 (>= 1:3.0)
- GCC 支援函式庫
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
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- dep: murasaki-common
- homology detection tool across multiple large genomes (common files)