[ 原始碼： pairtools ]
套件：python3-pairtools-examples（0.3.0-2 以及其他的）
Process sequencing data from a Hi-C experiment (examples)
Simple and fast command-line framework to process sequencing data from a Hi-C experiment.
Process pair-end sequence alignments and perform the following operations:
- Detect ligation junctions (a.k.a. Hi-C pairs) in aligned paired-end
sequences of Hi-C DNA molecules
- Sort .pairs files for downstream analyses
- Detect, tag and remove PCR/optical duplicates
- Generate extensive statistics of Hi-C datasets
- Select Hi-C pairs given flexibly defined criteria
- Restore .sam alignments from Hi-C pairs
This package contains some examples
其他與 python3-pairtools-examples 有關的套件
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- enh: python3-pairtools
- Framework to process sequencing data from a Hi-C experiment