套件：theseus（3.3.0-9）

[ 原始碼： theseus  ]

superimpose macromolecules using maximum likelihood

Theseus is a program that simultaneously superimposes multiple macromolecular structures. Theseus finds the optimal solution to the superposition problem using the method of maximum likelihood. By down-weighting variable regions of the superposition and by correcting for correlations among atoms, the ML superposition method produces very accurate structural alignments.

When macromolecules with different residue sequences are superimposed, other programs and algorithms discard residues that are aligned with gaps. Theseus, however, uses a novel superimposition algorithm that includes all of the data.

標籤: 生物學: 蛋白質, 領域: 生物學, field::biology:bioinformatics, field::biology:structural, 實做語言: C, 使用者介面: interface::commandline, role::program, Purpose: Analysing, use::comparing, works-with-format::plaintext

其他與 theseus 有關的套件

• dep: clustalo

  General-purpose multiple sequence alignment program for proteins

• dep: libc6 (>= 2.29)

  GNU C 函式庫：共用函式庫
  同時作為一個虛擬套件由這些套件填實： libc6-udeb

• dep: libgsl25 (>= 2.6)

  GNU Scientific Library (GSL) -- library package

• dep: muscle

  Multiple alignment program of protein sequences

• sug: clustalw

  global multiple nucleotide or peptide sequence alignment

• sug: dialign

  Segment-based multiple sequence alignment

• sug: kalign

  Global and progressive multiple sequence alignment

• sug: mafft

  Multiple alignment program for amino acid or nucleotide sequences

• sug: probcons

  PROBabilistic CONSistency-based multiple sequence alignment

• sug: t-coffee

  Multiple Sequence Alignment

• sug: theseus-examples

  superimpose macromolecules using maximum likelihood (examples)

下載 theseus

下載可用於所有硬體架構的

硬體架構	套件大小	安裝後大小	檔案
i386	283。1 kB	821。0 kB	[檔案列表]