[ 原始碼: libedlib ]
套件:edlib-aligner(1.2.7-4 以及其他的)
edlib sequence alignment tool using edit distance
Edlib is a lightweight and super fast C/C++ library for sequence alignment using edit distance. This package provides an aligner using this library.
Features of libedlib
* Calculates edit distance (Levehnstein distance). * It can find optimal alignment path (instructions how to transform first sequence into the second sequence). * It can find just the start and/or end locations of alignment path - can be useful when speed is more important than having exact alignment path. * Supports multiple alignment methods: global(NW), prefix(SHW) and infix(HW), each of them useful for different scenarios. * You can extend character equality definition, enabling you to e.g. have wildcard characters, to have case insensitive alignment or to work with degenerate nucleotides. * It can easily handle small or very large sequences, even when finding alignment path, while consuming very little memory. * Super fast thanks to Myers's bit-vector algorithm.
其他與 edlib-aligner 有關的套件
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- dep: libc6 (>= 2.34)
- GNU C 函式庫:共用函式庫
同時作為一個虛擬套件由這些套件填實: libc6-udeb
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- dep: libedlib1 (= 1.2.7-4+b1)
- library for sequence alignment using edit distance
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- dep: libgcc-s1 (>= 3.0) [除 armel, armhf]
- GCC 支援函式庫
- dep: libgcc-s1 (>= 3.5) [armel, armhf]
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
下載 edlib-aligner
硬體架構 | 版本 | 套件大小 | 安裝後大小 | 檔案 |
---|---|---|---|---|
amd64 | 1.2.7-4+b1 | 24。2 kB | 67。0 kB | [檔案列表] |
arm64 | 1.2.7-4+b1 | 22。4 kB | 87。0 kB | [檔案列表] |
armel | 1.2.7-4+b1 | 19。6 kB | 54。0 kB | [檔案列表] |
armhf | 1.2.7-4+b1 | 19。7 kB | 46。0 kB | [檔案列表] |
i386 | 1.2.7-4+b1 | 23。2 kB | 62。0 kB | [檔案列表] |
mips64el | 1.2.7-4+b1 | 23。1 kB | 88。0 kB | [檔案列表] |
mipsel | 1.2.7-4+b1 | 22。3 kB | 87。0 kB | [檔案列表] |
ppc64el | 1.2.7-4+b1 | 27。4 kB | 87。0 kB | [檔案列表] |
s390x | 1.2.7-4+b1 | 22。7 kB | 67。0 kB | [檔案列表] |