[ 源代码： prime-phylo ]
软件包：prime-phylo（1.0.11-12）
prime-phylo 的相关链接
Debian 的资源：
下载源码包 prime-phylo：
维护小组：
- Debian Med Packaging Team (QA 页面, 邮件存档)
- Erik Sjolund (QA 页面)
- Andreas Tille (QA 页面)
- Étienne Mollier (QA 页面)
外部的资源：
- 主页 [prime.sbc.su.se]
相似软件包：
bayesian estimation of gene trees taking the species tree into account
PrIME (Probabilistic Integrated Models of Evolution) is a package supporting inference of evolutionary parameters in a Bayesian framework using Markov chain Monte Carlo simulation. A distinguishing feature of PrIME is that the species tree is taken into account when analyzing gene trees.
The input data to PrIME is a multiple sequence alignment in FASTA format and the output data contains trees in Newick format.
其他与 prime-phylo 有关的软件包
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- dep: libblas3
- Basic Linear Algebra Reference implementations, shared library
- 或者 libblas.so.3
- 本虚包由这些包填实： libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
-
- dep: libboost-mpi1.83.0 (>= 1.83.0)
- C++ interface to the Message Passing Interface (MPI)
-
- dep: libboost-serialization1.83.0 (>= 1.83.0)
- serialization library for C++
-
- dep: libc6 (>= 2.38)
- GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6-udeb
-
- dep: libgcc-s1 (>= 4.5)
- GCC 支持库
-
- dep: liblapack3
- Library of linear algebra routines 3 - shared version
- 或者 liblapack.so.3
- 本虚包由这些包填实： liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial
-
- dep: libopenmpi3t64 (>= 4.1.6)
- high performance message passing library -- shared library
-
- dep: libstdc++6 (>= 14)
- GNU 标准 C++ 库，第3版
-
- dep: libxml2 (>= 2.7.4)
- GNOME XML 库
-
- dep: perl
- 拉里 沃尔的实用报表提取语言(Perl)
-
- sug: mafft
- Multiple alignment program for amino acid or nucleotide sequences
-
- sug: mrbayes
- Bayesian Inference of Phylogeny
-
- sug: muscle
- Multiple alignment program of protein sequences
-
- sug: njplot
- phylogenetic tree drawing program
-
- sug: phyml
- Phylogenetic estimation using Maximum Likelihood
-
- sug: probalign
- multiple sequence alignment using partition function posterior probabilities
-
- sug: python3-biopython
- Python3 library for bioinformatics
-
- sug: raxml
- Randomized Axelerated Maximum Likelihood of phylogenetic trees
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- sug: treeviewx
- Displays and prints phylogenetic trees