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[ 源代码: libseqlib  ]

软件包:libseqlib2(1.2.0+dfsg-11 以及其他的)

libseqlib2 的相关链接

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Debian 的资源:

下载源码包 libseqlib

维护小组:

外部的资源:

相似软件包:

C++ htslib/bwa-mem/fermi interface for interrogating sequence data

C++ API and command line tool that provides a rapid and user-friendly interface to BAM/SAM/CRAM files, global sequence alignment operations and sequence assembly. Four C libraries perform core operations in SeqLib: HTSlib for BAM access, BWA-MEM and BLAT for sequence alignment and Fermi for error correction and sequence assembly. Benchmarking indicates that SeqLib has lower CPU and memory requirements than leading C++ sequence analysis APIs. Minimal SeqLib code can extract, error-correct and assemble reads from a CRAM file and then align with BWA-MEM. SeqLib also provides additional capabilities, including chromosome-aware interval queries and read plotting. Command line tools are available for performing integrated error correction, micro-assemblies and alignment.

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下载 libseqlib2

下载可用于所有硬件架构的
硬件架构 版本 软件包大小 安装后大小 文件
i386 1.2.0+dfsg-11+b2 177.2 kB511.0 kB [文件列表]