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[ 源代码: murasaki  ]

软件包:murasaki(1.68.6-13 以及其他的)

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homology detection tool across multiple large genomes

Murasaki is a scalable and fast, language theory-based homology detection tool across multiple large genomes. It enable whole-genome scale multiple genome global alignments. Supports unlimited length gapped-seed patterns and unique TF-IDF based filtering.

Murasaki is an anchor alignment software, which is

 * exteremely fast (17 CPU hours for whole Human x Mouse genome (with
   40 nodes: 52 wall minutes))
 * scalable (Arbitrarily parallelizable across multiple nodes using MPI.
   Even a single node with 16GB of ram can handle over 1Gbp of sequence.)
 * unlimited pattern length
 * repeat tolerant
 * intelligent noise reduction

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下载可用于所有硬件架构的
硬件架构 版本 软件包大小 安装后大小 文件
armel 1.68.6-13+b5 444.2 kB3,315.0 kB [文件列表]