软件包：boxshade（3.3.1-14）

[ 源代码： boxshade  ]

Pretty-printing of multiple sequence alignments

Boxshade is a program for creating good looking printouts from multiple-aligned protein or DNA sequences. The program does not perform the alignment by itself and requires as input a file that was created by a multiple alignment program or manually edited with respective tools.

Boxshade reads multiple-aligned sequences from either PILEUP-MSF, CLUSTAL-ALN, MALIGNED-data and ESEE-save files (limited to a maximum of 150 sequences with up to 10000 elements each). Various kinds of shading can be applied to identical/similar residues. Output is written to screen or to a file in the following formats: ANSI/VT100, PS/EPS, RTF, HPGL, ReGIS, LJ250-printer, ASCII, xFIG, PICT, HTML

标签: 生物学: Clustal/ALN, 蛋白质, 领域: field::biology, field::biology:bioinformatics, 实做语言: implemented-in::c, interface::commandline, 角色: 程序, 范围: scope::utility, use::typesetting, 支持的格式: works-with-format::html, works-with-format::plaintext, works-with-format::postscript, works-with-format::tex, 处理: 需要一个额外的标签, 文本

其他与 boxshade 有关的软件包

• dep: libc6 (>= 2.7)

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6-udeb

• sug: kalign

  Global and progressive multiple sequence alignment

  或者 clustalw

  global multiple nucleotide or peptide sequence alignment

  或者 mafft

  Multiple alignment program for amino acid or nucleotide sequences

  或者 hmmer

  profile hidden Markov models for protein sequence analysis

• sug: seaview

  Multiplatform interface for sequence alignment and phylogeny

• sug: texlive-latex-extra

  TeX Live: LaTeX additional packages

• sug: xfig

  Facility for Interactive Generation of figures under X11

下载 boxshade

下载可用于所有硬件架构的

硬件架构	软件包大小	安装后大小	文件
armel	54.6 kB	163.0 kB	[文件列表]