[ 源代码: seqan-raptor ]
软件包:seqan-raptor(3.0.1+ds-5 以及其他的)
seqan-raptor 的相关链接
Debian 的资源:
下载源码包 seqan-raptor:
- [seqan-raptor_3.0.1+ds-5.dsc]
- [seqan-raptor_3.0.1+ds.orig.tar.xz]
- [seqan-raptor_3.0.1+ds-5.debian.tar.xz]
维护小组:
外部的资源:
- 主页 [github.com]
相似软件包:
pre-filter for querying very large collections of nucleotide sequences
Raptor is a system for approximately searching many queries such as next-generation sequencing reads or transcripts in large collections of nucleotide sequences. Raptor uses winnowing minimizers to define a set of representative k-mers, an extension of the interleaved Bloom filters (IBFs) as a set membership data structure and probabilistic thresholding for minimizers. This approach allows compression and partitioning of the IBF to enable the effective use of secondary memory.
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