软件包：r-bioc-variantannotation（1.50.0-1）

[ 源代码： r-bioc-variantannotation  ]

BioConductor annotation of genetic variants

This BioConductor package provides R functions to annotate variants, compute amino acid coding changess and to predict coding outcomes.

其他与 r-bioc-variantannotation 有关的软件包

• dep: libbz2-1.0

  高品质块排序文件压缩程序库 - 运行时库

• dep: libc6 (>= 2.34)

  GNU C 语言运行库：共享库
  同时作为一个虚包由这些包填实： libc6-udeb

• dep: libcurl4t64 (>= 7.18.0)

  简单易用的客户端 URL 传输软件库（OpenSSL 变种）

• dep: liblzma5 (>= 5.1.1alpha+20120614)

  XZ 格式压缩库

• dep: r-api-4.0

  本虚包由这些包填实： r-base-core

• dep: r-api-bioc-3.19

  本虚包由这些包填实： r-bioc-biocgenerics

• dep: r-bioc-annotationdbi (>= 1.66.0)

  GNU R Annotation Database Interface for BioConductor

• dep: r-bioc-biobase (>= 2.64.0)

  base functions for Bioconductor

• dep: r-bioc-biocgenerics (>= 0.50.0)

  generic functions for Bioconductor

• dep: r-bioc-biostrings (>= 2.72.1)

  GNU R string objects representing biological sequences

• dep: r-bioc-bsgenome (>= 1.72.0)

  BioConductor infrastructure for Biostrings-based genome data packages

• dep: r-bioc-genomeinfodb (>= 1.40.1)

  BioConductor utilities for manipulating chromosome identifiers

• dep: r-bioc-genomicfeatures (>= 1.56.0)

  GNU R tools for making and manipulating transcript centric annotations

• dep: r-bioc-genomicranges (>= 1.56.1)

  BioConductor representation and manipulation of genomic intervals

• dep: r-bioc-iranges (>= 2.38.1)

  GNU R low-level containers for storing sets of integer ranges

• dep: r-bioc-matrixgenerics (>= 1.16.0)

  S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects

• dep: r-bioc-rhtslib (>= 3.0.0)

  HTSlib high-throughput sequencing library as GNU R package

• dep: r-bioc-rsamtools (>= 2.20.0)

  GNU R binary alignment (BAM), variant call (BCF), or tabix file import

• dep: r-bioc-rtracklayer (>= 1.64.0)

  GNU R interface to genome browsers and their annotation tracks

• dep: r-bioc-s4vectors (>= 0.42.1)

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-summarizedexperiment (>= 1.34.0)

  BioConductor assay container

• dep: r-bioc-xvector (>= 0.44.0)

  BioConductor representation and manpulation of external sequences

• dep: r-bioc-zlibbioc (>= 1.50.0)

  (Virtual) zlibbioc Bioconductor package

• dep: r-cran-dbi

  GNU R package providing a generic database interface

• dep: zlib1g (>= 1:1.2.3.3)

  压缩库 - 运行时

• sug: r-bioc-annotationhub (>= 3.12.0)

  GNU R client to access AnnotationHub resources

• sug: r-bioc-biocstyle (>= 2.32.1)

  standard styles for vignettes and other Bioconductor documents

• sug: r-bioc-snpstats (>= 1.54.0)

  BioConductor SnpMatrix and XSnpMatrix classes and methods

• sug: r-cran-ggplot2

  implementation of the Grammar of Graphics

• sug: r-cran-httr

  GNU R tools for working with URLs and HTTP

• sug: r-cran-jsonlite

  Robust, High Performance JSON Parser and Generator for R

• sug: r-cran-knitr

  GNU R package for dynamic report generation using Literate Programming

• sug: r-cran-magick

  advanced graphics and image-processing in GNU R

• sug: r-cran-runit

  GNU R package providing unit testing framework

下载 r-bioc-variantannotation

下载可用于所有硬件架构的

硬件架构	软件包大小	安装后大小	文件
riscv64	3,437.7 kB	6,612.0 kB	[文件列表]