[ 源代码: r-bioc-genomicalignments ]
软件包:r-bioc-genomicalignments(1.40.0-1)
r-bioc-genomicalignments 的相关链接
Debian 的资源:
下载源码包 r-bioc-genomicalignments:
- [r-bioc-genomicalignments_1.40.0-1.dsc]
- [r-bioc-genomicalignments_1.40.0.orig.tar.gz]
- [r-bioc-genomicalignments_1.40.0-1.debian.tar.xz]
维护小组:
外部的资源:
- 主页 [bioconductor.org]
相似软件包:
BioConductor representation and manipulation of short genomic alignments
This BioConductor package provides efficient containers for storing and manipulating short genomic alignments (typically obtained by aligning short reads to a reference genome). This includes read counting, computing the coverage, junction detection, and working with the nucleotide content of the alignments.
其他与 r-bioc-genomicalignments 有关的软件包
|
|
|
|
-
- dep: libc6 (>= 2.17)
- GNU C 语言运行库:共享库
同时作为一个虚包由这些包填实: libc6-udeb
-
- dep: r-api-4.0
- 本虚包由这些包填实: r-base-core
-
- dep: r-api-bioc-3.19
- 本虚包由这些包填实: r-bioc-biocgenerics
-
- dep: r-bioc-biocgenerics (>= 0.50.0)
- generic functions for Bioconductor
-
- dep: r-bioc-biocparallel (>= 1.38.0)
- BioConductor facilities for parallel evaluation
-
- dep: r-bioc-biostrings (>= 2.72.1)
- GNU R string objects representing biological sequences
-
- dep: r-bioc-genomeinfodb (>= 1.40.1)
- BioConductor utilities for manipulating chromosome identifiers
-
- dep: r-bioc-genomicranges (>= 1.56.1)
- BioConductor representation and manipulation of genomic intervals
-
- dep: r-bioc-iranges (>= 2.38.1)
- GNU R low-level containers for storing sets of integer ranges
-
- dep: r-bioc-rsamtools (>= 2.20.0)
- GNU R binary alignment (BAM), variant call (BCF), or tabix file import
-
- dep: r-bioc-s4vectors (>= 0.42.1)
- BioConductor S4 implementation of vectors and lists
-
- dep: r-bioc-summarizedexperiment (>= 1.34.0)
- BioConductor assay container
-
- sug: r-bioc-biocstyle (>= 2.32.1)
- standard styles for vignettes and other Bioconductor documents
-
- sug: r-bioc-bsgenome (>= 1.72.0)
- BioConductor infrastructure for Biostrings-based genome data packages
-
- sug: r-bioc-deseq2 (>= 1.44.0)
- R package for RNA-Seq Differential Expression Analysis
-
- sug: r-bioc-edger (>= 4.2.0)
- Empirical analysis of digital gene expression data in R
-
- sug: r-bioc-genomicfeatures (>= 1.56.0)
- GNU R tools for making and manipulating transcript centric annotations
-
- sug: r-bioc-rtracklayer (>= 1.64.0)
- GNU R interface to genome browsers and their annotation tracks
-
- sug: r-bioc-shortread (>= 1.62.0)
- GNU R classes and methods for high-throughput short-read sequencing data
-
- sug: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
-
- sug: r-cran-runit
- GNU R package providing unit testing framework