软件包：mptp（0.2.5-1 以及其他的）
mptp 的相关链接
Debian 的资源：
下载源码包 mptp：
维护小组：
- Debian Med Packaging Team (QA 页面, 邮件存档)
- Andreas Tille (QA 页面)
- Nilesh Patra (QA 页面)
- Étienne Mollier (QA 页面)
外部的资源：
- 主页 [github.com]
相似软件包：
single-locus species delimitation
Implementation of a fast species delimitation method, based on PTP (Zhang et al. 2013) with a 64-bit multi-threaded design that handles very large datasets.
The tool mPTP can handle very large biodiversity datasets. It implements a fast method to compute the ML delimitation from an inferred phylogenetic tree of the samples. Using MCMC, it also computes the support values for each clade, which can be used to assess the confidence of the ML delimitation.
ML delimitation mPTP implements two flavours of the point-estimate solution. First, it implements the original method from (Zhang et al. 2013) where all within-species processes are modelled with a single exponential distribution. mPTP uses a dynamic programming implementation which estimates the ML delimitation faster and more accurately than the original PTP. The dynamic programming implementation has similar properties as (Gulek et al. 2010). See the wiki for more information. The second method assumes a distinct exponential distribution for the branching events of each of the delimited species allowing it to fit to a wider range of empirical datasets.
MCMC method mPTP generates support values for each clades. They represent the ratio of the number of samples for which a particular node was in the between-species process, to the total number of samples.
其他与 mptp 有关的软件包
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- dep: libc6 (>= 2.38) [除 alpha, ia64, ppc64, sh4]
- GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6-udeb
- dep: libc6 (>= 2.39) [sh4]
- dep: libc6 (>= 2.8) [ppc64]
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- dep: libc6.1 (>= 2.32) [ia64]
- GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6.1-udeb
- dep: libc6.1 (>= 2.38) [alpha]
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- dep: libgsl23 [ppc64]
- 软件包暂时不可用
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- dep: libgsl27 (>= 2.7.1) [ia64]
- GNU Scientific Library (GSL) -- library package
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- dep: libgslcblas0 [ppc64]
- GNU Scientific Library (GSL) -- blas library package
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- rec: bash-completion
- bash shell 的可编程补全
下载 mptp
| 硬件架构 | 版本 | 软件包大小 | 安装后大小 | 文件 |
|---|---|---|---|---|
| alpha （非官方移植版） | 0.2.5-1 | 81.7 kB | 361.0 kB | [文件列表] |
| amd64 | 0.2.5-1 | 82.2 kB | 293.0 kB | [文件列表] |
| arm64 | 0.2.5-1 | 77.2 kB | 297.0 kB | [文件列表] |
| armel | 0.2.5-1 | 77.1 kB | 284.0 kB | [文件列表] |
| armhf | 0.2.5-1 | 75.8 kB | 252.0 kB | [文件列表] |
| hppa （非官方移植版） | 0.2.5-1 | 77.4 kB | 280.0 kB | [文件列表] |
| i386 | 0.2.5-1 | 84.0 kB | 295.0 kB | [文件列表] |
| ia64 （非官方移植版） | 0.2.4-3+b1 | 92.0 kB | 397.0 kB | [文件列表] |
| m68k （非官方移植版） | 0.2.5-1 | 76.5 kB | 279.0 kB | [文件列表] |
| mips64el | 0.2.5-1 | 82.6 kB | 369.0 kB | [文件列表] |
| ppc64 （非官方移植版） | 0.2.3-1 | 57.7 kB | 191.0 kB | [文件列表] |
| ppc64el | 0.2.5-1 | 84.8 kB | 361.0 kB | [文件列表] |
| riscv64 | 0.2.5-1 | 82.4 kB | 273.0 kB | [文件列表] |
| s390x | 0.2.5-1 | 83.6 kB | 305.0 kB | [文件列表] |
| sh4 （非官方移植版） | 0.2.5-1 | 85.8 kB | 296.0 kB | [文件列表] |
| sparc64 （非官方移植版） | 0.2.5-1 | 75.0 kB | 1,195.0 kB | [文件列表] |
| x32 （非官方移植版） | 0.2.5-1 | 82.0 kB | 288.0 kB | [文件列表] |