[ 源代码： spoa ]
软件包：spoa（4.1.4-2 以及其他的）
SIMD partial order alignment tool
Spoa (SIMD POA) is a c++ implementation of the partial order alignment (POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which is used to generate consensus sequences (as described in 10.1093/bioinformatics/btg109). It supports three alignment modes: local (Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment (overlap).
其他与 spoa 有关的软件包
|
|
|
|
-
- dep: libc6 (>= 2.38)
- GNU C 语言运行库：共享库
同时作为一个虚包由这些包填实： libc6-udeb
-
- dep: libgcc-s1 (>= 3.0)
- GCC 支持库
-
- dep: libspoa7.0.0 (>= 4.1.4)
- SIMD partial order alignment library
-
- dep: libstdc++6 (>= 13.1)
- GNU 标准 C++ 库，第3版
-
- dep: zlib1g (>= 1:1.1.4)
- 压缩库 - 运行时