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[ 源代码: bandage  ]

软件包:bandage(0.9.0-2 以及其他的)

bandage 的相关链接

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Bioinformatics Application for Navigating De novo Assembly Graphs Easily

Bandage is a GUI program that allows users to interact with the assembly graphs made by de novo assemblers such as Velvet, SPAdes, MEGAHIT and others.

De novo assembly graphs contain not only assembled contigs but also the connections between those contigs, which were previously not easily accessible. Bandage visualises assembly graphs, with connections, using graph layout algorithms. Nodes in the drawn graph, which represent contigs, can be automatically labelled with their ID, length or depth. Users can interact with the graph by moving, labelling and colouring nodes. Sequence information can also be extracted directly from the graph viewer. By displaying connections between contigs, Bandage opens up new possibilities for analysing and improving de novo assemblies that are not possible by looking at contigs alone.

More information and download links are on the Bandage website: rrwick.github.io/Bandage

The package is relevant to the field of genome assembly.

标签: 界面工具箱: Qt

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下载 bandage

下载可用于所有硬件架构的
硬件架构 版本 软件包大小 安装后大小 文件
mips64el 0.9.0-2+b1 904.4 kB2,896.0 kB [文件列表]